Digital Drosophila Archive
551 lines
18 KiB
JSON
551 lines
18 KiB
JSON
{
|
|
"strata": {
|
|
"all": {
|
|
"neurons": 4064,
|
|
"source_groups": {
|
|
"KC": {
|
|
"due_edges": 7408,
|
|
"accepted_edges": 7345,
|
|
"rejected_edges": 63,
|
|
"due_contacts": 11685,
|
|
"accepted_contacts": 11550,
|
|
"rejected_contacts": 135,
|
|
"accepted_exc_SI": 3.17625,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.037125000000000005,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"APL": {
|
|
"due_edges": 106444,
|
|
"accepted_edges": 106417,
|
|
"rejected_edges": 27,
|
|
"due_contacts": 4507484,
|
|
"accepted_contacts": 4506387,
|
|
"rejected_contacts": 1097,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"ALPN": {
|
|
"due_edges": 308295,
|
|
"accepted_edges": 308193,
|
|
"rejected_edges": 102,
|
|
"due_contacts": 5615232,
|
|
"accepted_contacts": 5612721,
|
|
"rejected_contacts": 2511,
|
|
"accepted_exc_SI": 1542.0322500000002,
|
|
"accepted_inh_abs_SI": 1.4660250000000001,
|
|
"rejected_exc_SI": 0.690525,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"MBON": {
|
|
"due_edges": 35752,
|
|
"accepted_edges": 35752,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 67072,
|
|
"accepted_contacts": 67072,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 1.1528,
|
|
"accepted_inh_abs_SI": 17.292,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"anatomical_DAN": {
|
|
"due_edges": 116514,
|
|
"accepted_edges": 116508,
|
|
"rejected_edges": 6,
|
|
"due_contacts": 353119,
|
|
"accepted_contacts": 353108,
|
|
"rejected_contacts": 11,
|
|
"accepted_exc_SI": 97.0728,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.003025,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"due_edges": 55,
|
|
"accepted_edges": 55,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 55,
|
|
"accepted_contacts": 55,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.015125000000000001,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"other": {
|
|
"due_edges": 196419,
|
|
"accepted_edges": 196352,
|
|
"rejected_edges": 67,
|
|
"due_contacts": 758706,
|
|
"accepted_contacts": 758459,
|
|
"rejected_contacts": 247,
|
|
"accepted_exc_SI": 90.54595,
|
|
"accepted_inh_abs_SI": 117.23717499999997,
|
|
"rejected_exc_SI": 0.006050000000000001,
|
|
"rejected_inh_abs_SI": 0.061875000000000006
|
|
},
|
|
"unclassified": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
}
|
|
},
|
|
"no_accepted_exc_neurons": 0,
|
|
"no_accepted_ALPN_exc_neurons": 267,
|
|
"has_exc_but_never_active": 4022,
|
|
"metrics_sum": {
|
|
"APL_write_SI": 5231.91017634677,
|
|
"APL_write_ref_SI": 0.8843392326533794,
|
|
"APL_write_available_SI": 5231.025837114118,
|
|
"APL_pre_first_spike_SI": 5183.115684263668,
|
|
"APL_same_tick_first_spike_SI": 0.03484811742603779,
|
|
"negative_g_ticks": 3731003.0,
|
|
"refractory_ticks": 990.0,
|
|
"g_end_time_integral_V_ms": -16967.774449525008,
|
|
"V_end_time_integral_V_ms": -32863.85855435018,
|
|
"accepted_exc_before_first_SI": 1700.758675000001,
|
|
"accepted_inh_before_first_abs_SI": 134.09659999999997,
|
|
"APL_zeroed_due_edges": 106444.0,
|
|
"APL_zeroed_due_contacts": 4507484.0
|
|
},
|
|
"source_g_area_V_ms": {
|
|
"KC_exc": 15.978472756607989,
|
|
"KC_inh": 0.0,
|
|
"APL_exc": 0.0,
|
|
"APL_inh": 0.0,
|
|
"ALPN_exc": 7341.262901744236,
|
|
"ALPN_inh": -7.044313799969077,
|
|
"MBON_exc": 5.377135859788975,
|
|
"MBON_inh": -80.74459322595439,
|
|
"anatomical_DAN_exc": 451.6527376558057,
|
|
"anatomical_DAN_inh": 0.0,
|
|
"dopamine_annotation_only_exc": 0.07262494351176685,
|
|
"dopamine_annotation_only_inh": 0.0,
|
|
"other_exc": 438.2197947598249,
|
|
"other_inh": -553.8062255854381,
|
|
"unclassified_exc": 0.0,
|
|
"unclassified_inh": 0.0,
|
|
"graded_APL": -24578.742984633427
|
|
},
|
|
"initial_g_state_area_V_ms": 0.0,
|
|
"source_g_area_residual_V_ms": -4.143803356004838e-13,
|
|
"maximum_prethreshold_V": -0.04485955187611828,
|
|
"minimum_end_g_V": -0.36333694937637995
|
|
},
|
|
"ever_active": {
|
|
"neurons": 42,
|
|
"source_groups": {
|
|
"KC": {
|
|
"due_edges": 174,
|
|
"accepted_edges": 111,
|
|
"rejected_edges": 63,
|
|
"due_contacts": 321,
|
|
"accepted_contacts": 186,
|
|
"rejected_contacts": 135,
|
|
"accepted_exc_SI": 0.05115,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.037125000000000005,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"APL": {
|
|
"due_edges": 1004,
|
|
"accepted_edges": 977,
|
|
"rejected_edges": 27,
|
|
"due_contacts": 44306,
|
|
"accepted_contacts": 43209,
|
|
"rejected_contacts": 1097,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"ALPN": {
|
|
"due_edges": 5001,
|
|
"accepted_edges": 4899,
|
|
"rejected_edges": 102,
|
|
"due_contacts": 132607,
|
|
"accepted_contacts": 130096,
|
|
"rejected_contacts": 2511,
|
|
"accepted_exc_SI": 35.77117499999999,
|
|
"accepted_inh_abs_SI": 0.0052250000000000005,
|
|
"rejected_exc_SI": 0.690525,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"MBON": {
|
|
"due_edges": 403,
|
|
"accepted_edges": 403,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 885,
|
|
"accepted_contacts": 885,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.006325000000000001,
|
|
"accepted_inh_abs_SI": 0.23705,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"anatomical_DAN": {
|
|
"due_edges": 1190,
|
|
"accepted_edges": 1184,
|
|
"rejected_edges": 6,
|
|
"due_contacts": 3602,
|
|
"accepted_contacts": 3591,
|
|
"rejected_contacts": 11,
|
|
"accepted_exc_SI": 0.9875249999999998,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.003025,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"other": {
|
|
"due_edges": 2586,
|
|
"accepted_edges": 2519,
|
|
"rejected_edges": 67,
|
|
"due_contacts": 10446,
|
|
"accepted_contacts": 10199,
|
|
"rejected_contacts": 247,
|
|
"accepted_exc_SI": 0.9539750000000001,
|
|
"accepted_inh_abs_SI": 1.8416749999999995,
|
|
"rejected_exc_SI": 0.006050000000000001,
|
|
"rejected_inh_abs_SI": 0.061875
|
|
},
|
|
"unclassified": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
}
|
|
},
|
|
"no_accepted_exc_neurons": 0,
|
|
"no_accepted_ALPN_exc_neurons": 0,
|
|
"has_exc_but_never_active": 0,
|
|
"metrics_sum": {
|
|
"APL_write_SI": 50.78225558905761,
|
|
"APL_write_ref_SI": 0.8843392326533794,
|
|
"APL_write_available_SI": 49.89791635640424,
|
|
"APL_pre_first_spike_SI": 1.9877635059551393,
|
|
"APL_same_tick_first_spike_SI": 0.034848117426037786,
|
|
"negative_g_ticks": 32874.0,
|
|
"refractory_ticks": 990.0,
|
|
"g_end_time_integral_V_ms": -73.9421682658112,
|
|
"V_end_time_integral_V_ms": -271.4806963680369,
|
|
"accepted_exc_before_first_SI": 4.53365,
|
|
"accepted_inh_before_first_abs_SI": 0.18535000000000001,
|
|
"APL_zeroed_due_edges": 1004.0,
|
|
"APL_zeroed_due_contacts": 44306.0
|
|
},
|
|
"source_g_area_V_ms": {
|
|
"KC_exc": 0.1971194473102863,
|
|
"KC_inh": 0.0,
|
|
"APL_exc": 0.0,
|
|
"APL_inh": 0.0,
|
|
"ALPN_exc": 160.52695081902948,
|
|
"ALPN_inh": -0.024189166619923517,
|
|
"MBON_exc": 0.02954570145771576,
|
|
"MBON_inh": -1.106169395119082,
|
|
"anatomical_DAN_exc": 4.6268876197189375,
|
|
"anatomical_DAN_inh": 0.0,
|
|
"dopamine_annotation_only_exc": 0.0,
|
|
"dopamine_annotation_only_inh": 0.0,
|
|
"other_exc": 4.588775813827308,
|
|
"other_inh": -8.261447961394223,
|
|
"unclassified_exc": 0.0,
|
|
"unclassified_inh": 0.0,
|
|
"graded_APL": -234.5196411440217
|
|
},
|
|
"initial_g_state_area_V_ms": 0.0,
|
|
"source_g_area_residual_V_ms": 3.381669944069188e-14,
|
|
"maximum_prethreshold_V": -0.04485955187611828,
|
|
"minimum_end_g_V": -0.09390075422410307
|
|
},
|
|
"never_active": {
|
|
"neurons": 4022,
|
|
"source_groups": {
|
|
"KC": {
|
|
"due_edges": 7234,
|
|
"accepted_edges": 7234,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 11364,
|
|
"accepted_contacts": 11364,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 3.1251,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"APL": {
|
|
"due_edges": 105440,
|
|
"accepted_edges": 105440,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 4463178,
|
|
"accepted_contacts": 4463178,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"ALPN": {
|
|
"due_edges": 303294,
|
|
"accepted_edges": 303294,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 5482625,
|
|
"accepted_contacts": 5482625,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 1506.2610750000001,
|
|
"accepted_inh_abs_SI": 1.4608000000000003,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"MBON": {
|
|
"due_edges": 35349,
|
|
"accepted_edges": 35349,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 66187,
|
|
"accepted_contacts": 66187,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 1.1464750000000001,
|
|
"accepted_inh_abs_SI": 17.05495,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"anatomical_DAN": {
|
|
"due_edges": 115324,
|
|
"accepted_edges": 115324,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 349517,
|
|
"accepted_contacts": 349517,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 96.085275,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"due_edges": 55,
|
|
"accepted_edges": 55,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 55,
|
|
"accepted_contacts": 55,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.015125000000000001,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"other": {
|
|
"due_edges": 193833,
|
|
"accepted_edges": 193833,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 748260,
|
|
"accepted_contacts": 748260,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 89.59197499999999,
|
|
"accepted_inh_abs_SI": 115.39549999999997,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"unclassified": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
}
|
|
},
|
|
"no_accepted_exc_neurons": 0,
|
|
"no_accepted_ALPN_exc_neurons": 267,
|
|
"has_exc_but_never_active": 4022,
|
|
"metrics_sum": {
|
|
"APL_write_SI": 5181.127920757714,
|
|
"APL_write_ref_SI": 0.0,
|
|
"APL_write_available_SI": 5181.127920757714,
|
|
"APL_pre_first_spike_SI": 5181.127920757714,
|
|
"APL_same_tick_first_spike_SI": 0.0,
|
|
"negative_g_ticks": 3698129.0,
|
|
"refractory_ticks": 0.0,
|
|
"g_end_time_integral_V_ms": -16893.832281259198,
|
|
"V_end_time_integral_V_ms": -32592.37785798214,
|
|
"accepted_exc_before_first_SI": 1696.2250250000009,
|
|
"accepted_inh_before_first_abs_SI": 133.91124999999997,
|
|
"APL_zeroed_due_edges": 105440.0,
|
|
"APL_zeroed_due_contacts": 4463178.0
|
|
},
|
|
"source_g_area_V_ms": {
|
|
"KC_exc": 15.781353309297701,
|
|
"KC_inh": 0.0,
|
|
"APL_exc": 0.0,
|
|
"APL_inh": 0.0,
|
|
"ALPN_exc": 7180.735950925206,
|
|
"ALPN_inh": -7.020124633349153,
|
|
"MBON_exc": 5.34759015833126,
|
|
"MBON_inh": -79.63842383083531,
|
|
"anatomical_DAN_exc": 447.0258500360868,
|
|
"anatomical_DAN_inh": 0.0,
|
|
"dopamine_annotation_only_exc": 0.07262494351176685,
|
|
"dopamine_annotation_only_inh": 0.0,
|
|
"other_exc": 433.63101894599754,
|
|
"other_inh": -545.544777624044,
|
|
"unclassified_exc": 0.0,
|
|
"unclassified_inh": 0.0,
|
|
"graded_APL": -24344.223343489404
|
|
},
|
|
"initial_g_state_area_V_ms": 0.0,
|
|
"source_g_area_residual_V_ms": -4.481970350411757e-13,
|
|
"maximum_prethreshold_V": -0.0450154445946837,
|
|
"minimum_end_g_V": -0.36333694937637995
|
|
}
|
|
},
|
|
"ledger_max_abs_error_V": 2.168404344971009e-19,
|
|
"ledger_max_bound_V": 7.924813050488636e-14,
|
|
"ledger_roundoff_bound_pass": true,
|
|
"ledger_accumulator_mantissa_bits": 63,
|
|
"ledger_bound_formula": "64 * eps(longdouble) * (ticks+1) * (sum_abs_actual_stage_deltas + abs(initial_g) + abs(final_g)) per KC",
|
|
"source_shadow_max_residual_V": 2.7755575615628914e-16,
|
|
"source_area_max_residual_V_ms": 2.4868995751603507e-14,
|
|
"source_shadow_meaning": "Signed source/sign g bookkeeping under observed availability/reset only; non-feedback, not counterfactual",
|
|
"cumulative_increment_units": "SI volts; sums of individual increments, not instantaneous conductance",
|
|
"source_state_area_units": "V*ms; post-APL source-state left samples times dt .1ms",
|
|
"activity_strata_outcome_defined": true,
|
|
"APL_cause_of_CAL_failure_proven": false,
|
|
"full_CAL_all_tick_subset_state_independently_verified": false,
|
|
"case": "cal-physiological-04-s51103",
|
|
"repeat": 0,
|
|
"kind": "calibration",
|
|
"pass_all": true,
|
|
"exact": {
|
|
"v": true,
|
|
"g": true,
|
|
"ref": true,
|
|
"counts": true,
|
|
"step": true,
|
|
"neuron_idx": true
|
|
},
|
|
"full_KC_sparse_events_and_final_state_exact": true,
|
|
"every_tick_fixture_pre_post_state_exact": false,
|
|
"graph": {
|
|
"graph_name": "full",
|
|
"graph_nodes": 166700,
|
|
"graph_edges": 25582938,
|
|
"KC_targets": 4064,
|
|
"incoming_edges": 830465,
|
|
"incoming_contacts": 2082231,
|
|
"zeroed_APL_incoming_edges": 4633,
|
|
"groups": {
|
|
"KC": {
|
|
"edges": 642933,
|
|
"contacts": 1153845
|
|
},
|
|
"APL": {
|
|
"edges": 4633,
|
|
"contacts": 196200
|
|
},
|
|
"ALPN": {
|
|
"edges": 22586,
|
|
"contacts": 390928
|
|
},
|
|
"MBON": {
|
|
"edges": 6813,
|
|
"contacts": 11181
|
|
},
|
|
"anatomical_DAN": {
|
|
"edges": 129113,
|
|
"contacts": 225127
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"edges": 35,
|
|
"contacts": 38
|
|
},
|
|
"other": {
|
|
"edges": 24211,
|
|
"contacts": 103979
|
|
},
|
|
"unclassified": {
|
|
"edges": 141,
|
|
"contacts": 933
|
|
}
|
|
},
|
|
"source_graph": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
|
|
"conditional_target_filter_only": true,
|
|
"source_graph_modified": false
|
|
},
|
|
"input": {
|
|
"requests": 72,
|
|
"accepted": 52,
|
|
"rejected": 20,
|
|
"actual_spikes_by_source_group": {
|
|
"KC": 45,
|
|
"APL": 46,
|
|
"ALPN": 5184,
|
|
"MBON": 246,
|
|
"anatomical_DAN": 137,
|
|
"dopamine_annotation_only": 89,
|
|
"other": 25090,
|
|
"unclassified": 470
|
|
},
|
|
"all_ALPN": 686,
|
|
"odor_design_target_count": 48,
|
|
"PN_ever_requested": 24,
|
|
"PN_ever_accepted_request": 23,
|
|
"PN_actual_active": 547,
|
|
"design_target_PN_spikes": 547,
|
|
"non_design_ALPN_spikes": 4637,
|
|
"accepted_request_is_not_proof_spike_was_caused_exclusively_by_request": true,
|
|
"actual_requested_events_not_forced_to_equal_across_odors": true
|
|
},
|
|
"steps": 1000,
|
|
"duration_ms": 100.0,
|
|
"KC_active": 42,
|
|
"KC_spikes": 45,
|
|
"pending_after_record_window": {
|
|
"edge_events": 13013,
|
|
"contacts": 160327,
|
|
"nominal_abs_SI": 44.08607500000003
|
|
},
|
|
"mode": "physiological",
|
|
"odor_id": "XHIUFYZDQBSEMF-UHFFFAOYSA-N",
|
|
"seed": 51103,
|
|
"CPU_audit_wall_seconds": 1.8262473409995437,
|
|
"original_brain_time_and_wall_not_rebenchmarked": true,
|
|
"training": false,
|
|
"new_brain_simulation": false,
|
|
"candidate_generated": false,
|
|
"input_sha256": {
|
|
"state.npz": "af3584ae4e02c036905d0e75711a23e6053370b4b788383ce5919dfd9cfba545",
|
|
"apl-inhibition.float32.npy": "9643a03dbd3e406cf80787d91a28c69e2f1c9a4ae2ef9a9b64a7133b572c44e5",
|
|
"requests.csv": "6daf30279a8618340befac18e50be854e1567c988b4a7210cbe55d2128adeabd",
|
|
"summary.json": "e05ceb892d66409a484e4981eaea0efd5cb0c28bb54d1438a5c11cebba725329"
|
|
}
|
|
}
|