Digital Drosophila Archive
551 lines
18 KiB
JSON
551 lines
18 KiB
JSON
{
|
|
"strata": {
|
|
"all": {
|
|
"neurons": 4064,
|
|
"source_groups": {
|
|
"KC": {
|
|
"due_edges": 12554,
|
|
"accepted_edges": 12368,
|
|
"rejected_edges": 186,
|
|
"due_contacts": 20037,
|
|
"accepted_contacts": 19743,
|
|
"rejected_contacts": 294,
|
|
"accepted_exc_SI": 5.429325,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.08085,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"APL": {
|
|
"due_edges": 99667,
|
|
"accepted_edges": 99629,
|
|
"rejected_edges": 38,
|
|
"due_contacts": 4220858,
|
|
"accepted_contacts": 4219549,
|
|
"rejected_contacts": 1309,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"ALPN": {
|
|
"due_edges": 324105,
|
|
"accepted_edges": 323957,
|
|
"rejected_edges": 148,
|
|
"due_contacts": 5917754,
|
|
"accepted_contacts": 5913974,
|
|
"rejected_contacts": 3780,
|
|
"accepted_exc_SI": 1624.8177000000003,
|
|
"accepted_inh_abs_SI": 1.52515,
|
|
"rejected_exc_SI": 1.039225,
|
|
"rejected_inh_abs_SI": 0.000275
|
|
},
|
|
"MBON": {
|
|
"due_edges": 35657,
|
|
"accepted_edges": 35653,
|
|
"rejected_edges": 4,
|
|
"due_contacts": 66401,
|
|
"accepted_contacts": 66394,
|
|
"rejected_contacts": 7,
|
|
"accepted_exc_SI": 1.366475,
|
|
"accepted_inh_abs_SI": 16.891875,
|
|
"rejected_exc_SI": 0.000825,
|
|
"rejected_inh_abs_SI": 0.0011
|
|
},
|
|
"anatomical_DAN": {
|
|
"due_edges": 108420,
|
|
"accepted_edges": 108405,
|
|
"rejected_edges": 15,
|
|
"due_contacts": 331338,
|
|
"accepted_contacts": 331311,
|
|
"rejected_contacts": 27,
|
|
"accepted_exc_SI": 91.07862499999999,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.007425000000000001,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"due_edges": 32,
|
|
"accepted_edges": 32,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 32,
|
|
"accepted_contacts": 32,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0088,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"other": {
|
|
"due_edges": 199346,
|
|
"accepted_edges": 199185,
|
|
"rejected_edges": 161,
|
|
"due_contacts": 779048,
|
|
"accepted_contacts": 778531,
|
|
"rejected_contacts": 517,
|
|
"accepted_exc_SI": 97.65965,
|
|
"accepted_inh_abs_SI": 115.47387499999996,
|
|
"rejected_exc_SI": 0.01925,
|
|
"rejected_inh_abs_SI": 0.122925
|
|
},
|
|
"unclassified": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
}
|
|
},
|
|
"no_accepted_exc_neurons": 0,
|
|
"no_accepted_ALPN_exc_neurons": 267,
|
|
"has_exc_but_never_active": 3985,
|
|
"metrics_sum": {
|
|
"APL_write_SI": 5652.393735301459,
|
|
"APL_write_ref_SI": 1.3549282047003508,
|
|
"APL_write_available_SI": 5651.038807096758,
|
|
"APL_pre_first_spike_SI": 5574.761798942634,
|
|
"APL_same_tick_first_spike_SI": 0.0542330372184515,
|
|
"negative_g_ticks": 3790319.0,
|
|
"refractory_ticks": 1804.0,
|
|
"g_end_time_integral_V_ms": -18682.95304936246,
|
|
"V_end_time_integral_V_ms": -34421.736157435764,
|
|
"accepted_exc_before_first_SI": 1765.8459500000008,
|
|
"accepted_inh_before_first_abs_SI": 129.85664999999995,
|
|
"APL_zeroed_due_edges": 99667.0,
|
|
"APL_zeroed_due_contacts": 4220858.0
|
|
},
|
|
"source_g_area_V_ms": {
|
|
"KC_exc": 27.098497232461927,
|
|
"KC_inh": 0.0,
|
|
"APL_exc": 0.0,
|
|
"APL_inh": 0.0,
|
|
"ALPN_exc": 7734.566901026146,
|
|
"ALPN_inh": -7.291682041403466,
|
|
"MBON_exc": 6.542834365797477,
|
|
"MBON_inh": -81.04838557566003,
|
|
"anatomical_DAN_exc": 433.39791557637227,
|
|
"anatomical_DAN_inh": 0.0,
|
|
"dopamine_annotation_only_exc": 0.04000574930637001,
|
|
"dopamine_annotation_only_inh": 0.0,
|
|
"other_exc": 447.3926140633563,
|
|
"other_inh": -555.4780754401215,
|
|
"unclassified_exc": 0.0,
|
|
"unclassified_inh": 0.0,
|
|
"graded_APL": -26688.173674318714
|
|
},
|
|
"initial_g_state_area_V_ms": 0.0,
|
|
"source_g_area_residual_V_ms": 1.154685288357049e-12,
|
|
"maximum_prethreshold_V": -0.04487276445227959,
|
|
"minimum_end_g_V": -0.370456803322823
|
|
},
|
|
"ever_active": {
|
|
"neurons": 79,
|
|
"source_groups": {
|
|
"KC": {
|
|
"due_edges": 721,
|
|
"accepted_edges": 535,
|
|
"rejected_edges": 186,
|
|
"due_contacts": 1201,
|
|
"accepted_contacts": 907,
|
|
"rejected_contacts": 294,
|
|
"accepted_exc_SI": 0.249425,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.08085000000000002,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"APL": {
|
|
"due_edges": 1737,
|
|
"accepted_edges": 1699,
|
|
"rejected_edges": 38,
|
|
"due_contacts": 60024,
|
|
"accepted_contacts": 58715,
|
|
"rejected_contacts": 1309,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"ALPN": {
|
|
"due_edges": 8009,
|
|
"accepted_edges": 7861,
|
|
"rejected_edges": 148,
|
|
"due_contacts": 219579,
|
|
"accepted_contacts": 215799,
|
|
"rejected_contacts": 3780,
|
|
"accepted_exc_SI": 59.334,
|
|
"accepted_inh_abs_SI": 0.010725000000000002,
|
|
"rejected_exc_SI": 1.039225,
|
|
"rejected_inh_abs_SI": 0.000275
|
|
},
|
|
"MBON": {
|
|
"due_edges": 564,
|
|
"accepted_edges": 560,
|
|
"rejected_edges": 4,
|
|
"due_contacts": 1058,
|
|
"accepted_contacts": 1051,
|
|
"rejected_contacts": 7,
|
|
"accepted_exc_SI": 0.0121,
|
|
"accepted_inh_abs_SI": 0.27692500000000003,
|
|
"rejected_exc_SI": 0.000825,
|
|
"rejected_inh_abs_SI": 0.0011
|
|
},
|
|
"anatomical_DAN": {
|
|
"due_edges": 1689,
|
|
"accepted_edges": 1674,
|
|
"rejected_edges": 15,
|
|
"due_contacts": 4358,
|
|
"accepted_contacts": 4331,
|
|
"rejected_contacts": 27,
|
|
"accepted_exc_SI": 1.1910249999999996,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.007424999999999999,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"other": {
|
|
"due_edges": 6624,
|
|
"accepted_edges": 6463,
|
|
"rejected_edges": 161,
|
|
"due_contacts": 21103,
|
|
"accepted_contacts": 20586,
|
|
"rejected_contacts": 517,
|
|
"accepted_exc_SI": 1.5138749999999999,
|
|
"accepted_inh_abs_SI": 4.125274999999998,
|
|
"rejected_exc_SI": 0.019250000000000003,
|
|
"rejected_inh_abs_SI": 0.122925
|
|
},
|
|
"unclassified": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
}
|
|
},
|
|
"no_accepted_exc_neurons": 0,
|
|
"no_accepted_ALPN_exc_neurons": 0,
|
|
"has_exc_but_never_active": 0,
|
|
"metrics_sum": {
|
|
"APL_write_SI": 80.49544514358645,
|
|
"APL_write_ref_SI": 1.3549282047003504,
|
|
"APL_write_available_SI": 79.14051693888614,
|
|
"APL_pre_first_spike_SI": 2.863508784762118,
|
|
"APL_same_tick_first_spike_SI": 0.0542330372184515,
|
|
"negative_g_ticks": 63364.0,
|
|
"refractory_ticks": 1804.0,
|
|
"g_end_time_integral_V_ms": -114.78968562929802,
|
|
"V_end_time_integral_V_ms": -496.88672677968856,
|
|
"accepted_exc_before_first_SI": 7.7858,
|
|
"accepted_inh_before_first_abs_SI": 0.37867499999999993,
|
|
"APL_zeroed_due_edges": 1737.0,
|
|
"APL_zeroed_due_contacts": 60024.0
|
|
},
|
|
"source_g_area_V_ms": {
|
|
"KC_exc": 0.9394225311082434,
|
|
"KC_inh": 0.0,
|
|
"APL_exc": 0.0,
|
|
"APL_inh": 0.0,
|
|
"ALPN_exc": 265.9021730684899,
|
|
"ALPN_inh": -0.044211596779003305,
|
|
"MBON_exc": 0.060107025465363215,
|
|
"MBON_inh": -1.3059210237639833,
|
|
"anatomical_DAN_exc": 5.647996848510671,
|
|
"anatomical_DAN_inh": 0.0,
|
|
"dopamine_annotation_only_exc": 0.0,
|
|
"dopamine_annotation_only_inh": 0.0,
|
|
"other_exc": 6.843827403547343,
|
|
"other_inh": -19.060135609121648,
|
|
"unclassified_exc": 0.0,
|
|
"unclassified_inh": 0.0,
|
|
"graded_APL": -373.77294427675486
|
|
},
|
|
"initial_g_state_area_V_ms": 0.0,
|
|
"source_g_area_residual_V_ms": 8.640093848710784e-14,
|
|
"maximum_prethreshold_V": -0.04487276445227959,
|
|
"minimum_end_g_V": -0.09632507506589563
|
|
},
|
|
"never_active": {
|
|
"neurons": 3985,
|
|
"source_groups": {
|
|
"KC": {
|
|
"due_edges": 11833,
|
|
"accepted_edges": 11833,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 18836,
|
|
"accepted_contacts": 18836,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 5.1799,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"APL": {
|
|
"due_edges": 97930,
|
|
"accepted_edges": 97930,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 4160834,
|
|
"accepted_contacts": 4160834,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"ALPN": {
|
|
"due_edges": 316096,
|
|
"accepted_edges": 316096,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 5698175,
|
|
"accepted_contacts": 5698175,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 1565.4837000000002,
|
|
"accepted_inh_abs_SI": 1.5144250000000001,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"MBON": {
|
|
"due_edges": 35093,
|
|
"accepted_edges": 35093,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 65343,
|
|
"accepted_contacts": 65343,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 1.354375,
|
|
"accepted_inh_abs_SI": 16.61495,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"anatomical_DAN": {
|
|
"due_edges": 106731,
|
|
"accepted_edges": 106731,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 326980,
|
|
"accepted_contacts": 326980,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 89.88759999999999,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"due_edges": 32,
|
|
"accepted_edges": 32,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 32,
|
|
"accepted_contacts": 32,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0088,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"other": {
|
|
"due_edges": 192722,
|
|
"accepted_edges": 192722,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 757945,
|
|
"accepted_contacts": 757945,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 96.145775,
|
|
"accepted_inh_abs_SI": 111.34859999999998,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
},
|
|
"unclassified": {
|
|
"due_edges": 0,
|
|
"accepted_edges": 0,
|
|
"rejected_edges": 0,
|
|
"due_contacts": 0,
|
|
"accepted_contacts": 0,
|
|
"rejected_contacts": 0,
|
|
"accepted_exc_SI": 0.0,
|
|
"accepted_inh_abs_SI": 0.0,
|
|
"rejected_exc_SI": 0.0,
|
|
"rejected_inh_abs_SI": 0.0
|
|
}
|
|
},
|
|
"no_accepted_exc_neurons": 0,
|
|
"no_accepted_ALPN_exc_neurons": 267,
|
|
"has_exc_but_never_active": 3985,
|
|
"metrics_sum": {
|
|
"APL_write_SI": 5571.898290157873,
|
|
"APL_write_ref_SI": 0.0,
|
|
"APL_write_available_SI": 5571.898290157873,
|
|
"APL_pre_first_spike_SI": 5571.898290157873,
|
|
"APL_same_tick_first_spike_SI": 0.0,
|
|
"negative_g_ticks": 3726955.0,
|
|
"refractory_ticks": 0.0,
|
|
"g_end_time_integral_V_ms": -18568.16336373316,
|
|
"V_end_time_integral_V_ms": -33924.84943065607,
|
|
"accepted_exc_before_first_SI": 1758.0601500000007,
|
|
"accepted_inh_before_first_abs_SI": 129.47797499999996,
|
|
"APL_zeroed_due_edges": 97930.0,
|
|
"APL_zeroed_due_contacts": 4160834.0
|
|
},
|
|
"source_g_area_V_ms": {
|
|
"KC_exc": 26.15907470135368,
|
|
"KC_inh": 0.0,
|
|
"APL_exc": 0.0,
|
|
"APL_inh": 0.0,
|
|
"ALPN_exc": 7468.6647279576555,
|
|
"ALPN_inh": -7.247470444624462,
|
|
"MBON_exc": 6.482727340332113,
|
|
"MBON_inh": -79.74246455189603,
|
|
"anatomical_DAN_exc": 427.74991872786154,
|
|
"anatomical_DAN_inh": 0.0,
|
|
"dopamine_annotation_only_exc": 0.04000574930637001,
|
|
"dopamine_annotation_only_inh": 0.0,
|
|
"other_exc": 440.5487866598089,
|
|
"other_inh": -536.4179398309998,
|
|
"unclassified_exc": 0.0,
|
|
"unclassified_inh": 0.0,
|
|
"graded_APL": -26314.400730041954
|
|
},
|
|
"initial_g_state_area_V_ms": 0.0,
|
|
"source_g_area_residual_V_ms": 1.0682843498699413e-12,
|
|
"maximum_prethreshold_V": -0.04501478222436933,
|
|
"minimum_end_g_V": -0.370456803322823
|
|
}
|
|
},
|
|
"ledger_max_abs_error_V": 2.168404344971009e-19,
|
|
"ledger_max_bound_V": 8.348399503457516e-14,
|
|
"ledger_roundoff_bound_pass": true,
|
|
"ledger_accumulator_mantissa_bits": 63,
|
|
"ledger_bound_formula": "64 * eps(longdouble) * (ticks+1) * (sum_abs_actual_stage_deltas + abs(initial_g) + abs(final_g)) per KC",
|
|
"source_shadow_max_residual_V": 6.106226635438361e-16,
|
|
"source_area_max_residual_V_ms": 3.375077994860476e-14,
|
|
"source_shadow_meaning": "Signed source/sign g bookkeeping under observed availability/reset only; non-feedback, not counterfactual",
|
|
"cumulative_increment_units": "SI volts; sums of individual increments, not instantaneous conductance",
|
|
"source_state_area_units": "V*ms; post-APL source-state left samples times dt .1ms",
|
|
"activity_strata_outcome_defined": true,
|
|
"APL_cause_of_CAL_failure_proven": false,
|
|
"full_CAL_all_tick_subset_state_independently_verified": false,
|
|
"case": "cal-physiological-01-s51103",
|
|
"repeat": 0,
|
|
"kind": "calibration",
|
|
"pass_all": true,
|
|
"exact": {
|
|
"v": true,
|
|
"g": true,
|
|
"ref": true,
|
|
"counts": true,
|
|
"step": true,
|
|
"neuron_idx": true
|
|
},
|
|
"full_KC_sparse_events_and_final_state_exact": true,
|
|
"every_tick_fixture_pre_post_state_exact": false,
|
|
"graph": {
|
|
"graph_name": "full",
|
|
"graph_nodes": 166700,
|
|
"graph_edges": 25582938,
|
|
"KC_targets": 4064,
|
|
"incoming_edges": 830465,
|
|
"incoming_contacts": 2082231,
|
|
"zeroed_APL_incoming_edges": 4633,
|
|
"groups": {
|
|
"KC": {
|
|
"edges": 642933,
|
|
"contacts": 1153845
|
|
},
|
|
"APL": {
|
|
"edges": 4633,
|
|
"contacts": 196200
|
|
},
|
|
"ALPN": {
|
|
"edges": 22586,
|
|
"contacts": 390928
|
|
},
|
|
"MBON": {
|
|
"edges": 6813,
|
|
"contacts": 11181
|
|
},
|
|
"anatomical_DAN": {
|
|
"edges": 129113,
|
|
"contacts": 225127
|
|
},
|
|
"dopamine_annotation_only": {
|
|
"edges": 35,
|
|
"contacts": 38
|
|
},
|
|
"other": {
|
|
"edges": 24211,
|
|
"contacts": 103979
|
|
},
|
|
"unclassified": {
|
|
"edges": 141,
|
|
"contacts": 933
|
|
}
|
|
},
|
|
"source_graph": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
|
|
"conditional_target_filter_only": true,
|
|
"source_graph_modified": false
|
|
},
|
|
"input": {
|
|
"requests": 113,
|
|
"accepted": 75,
|
|
"rejected": 38,
|
|
"actual_spikes_by_source_group": {
|
|
"KC": 82,
|
|
"APL": 45,
|
|
"ALPN": 5343,
|
|
"MBON": 248,
|
|
"anatomical_DAN": 122,
|
|
"dopamine_annotation_only": 55,
|
|
"other": 23921,
|
|
"unclassified": 473
|
|
},
|
|
"all_ALPN": 686,
|
|
"odor_design_target_count": 55,
|
|
"PN_ever_requested": 34,
|
|
"PN_ever_accepted_request": 34,
|
|
"PN_actual_active": 544,
|
|
"design_target_PN_spikes": 570,
|
|
"non_design_ALPN_spikes": 4773,
|
|
"accepted_request_is_not_proof_spike_was_caused_exclusively_by_request": true,
|
|
"actual_requested_events_not_forced_to_equal_across_odors": true
|
|
},
|
|
"steps": 1000,
|
|
"duration_ms": 100.0,
|
|
"KC_active": 79,
|
|
"KC_spikes": 82,
|
|
"pending_after_record_window": {
|
|
"edge_events": 17764,
|
|
"contacts": 328864,
|
|
"nominal_abs_SI": 36.46940000000005
|
|
},
|
|
"mode": "physiological",
|
|
"odor_id": "LABTWGUMFABVFG-ARJAWSKDSA-N",
|
|
"seed": 51103,
|
|
"CPU_audit_wall_seconds": 1.8306475959998352,
|
|
"original_brain_time_and_wall_not_rebenchmarked": true,
|
|
"training": false,
|
|
"new_brain_simulation": false,
|
|
"candidate_generated": false,
|
|
"input_sha256": {
|
|
"state.npz": "ff5ad0909e15c9010a996626fd8cce8534d82564bd5a6680f202ea197079dfb9",
|
|
"apl-inhibition.float32.npy": "52cff7ae3a4ed0b9f7de7adf8c0abdfde0af3b6aace21231d85d589ae5741c25",
|
|
"requests.csv": "1fc6639531d8f77a43b197403a3a7727e218e6011157549c2d38449a41f36978",
|
|
"summary.json": "2287d1957d005332b98709444733cd0a0fdf61ebd00325bb2815a85a42692459"
|
|
}
|
|
}
|