Digital Drosophila Archive
115 lines
4.7 KiB
YAML
115 lines
4.7 KiB
YAML
phase: 4G
|
|
names:
|
|
reference: MaleCNS-LIF-reference-v1
|
|
runtime: MaleCNS-LIF-runtime-v1
|
|
io_api: MaleCNS-BrainIO-v1
|
|
activity_stream: MaleCNS-ActivityStream-v1
|
|
interface: MaleCNS-FrozenInterface-v1
|
|
candidate: MaleCNS-FrozenInterface-v1-candidate
|
|
|
|
paths:
|
|
connectome_root: /data/digital-drosophila/datasets/male-cns-v1.0/processed/neuron-only
|
|
model_root: /data/digital-drosophila/models/male-cns-lif
|
|
reference_root: /data/digital-drosophila/models/male-cns-lif/reference-v1
|
|
runtime_root: /data/digital-drosophila/models/male-cns-lif/runtime-v1
|
|
io_root: /data/digital-drosophila/models/male-cns-lif/io-v1
|
|
phase4c_root: /data/digital-drosophila/experiments/phase4c-runtime
|
|
phase4d_root: /data/digital-drosophila/experiments/phase4d-io
|
|
phase4e_root: /data/digital-drosophila/experiments/phase4e-visual-calibration
|
|
phase4f_root: /data/digital-drosophila/experiments/phase4f-retinotopic-vision
|
|
phase4f_model_root: /data/digital-drosophila/models/male-cns-lif/visual-encoder-v1
|
|
interface_root: /data/digital-drosophila/models/male-cns-lif/frozen-interface-v1
|
|
learned_root: /data/digital-drosophila/models/learned/phase4g
|
|
experiment_root: /data/digital-drosophila/experiments/phase4g-frozen-interface
|
|
|
|
device:
|
|
required_name_substring: RTX 4090
|
|
launcher_visible_gpu_uuid: GPU-79f3a85d-adce-7833-7003-6488140ca596
|
|
|
|
model:
|
|
dt_ms: 0.1
|
|
membrane_tau_ms: 20.0
|
|
synaptic_tau_ms: 5.0
|
|
refractory_ms: 2.2
|
|
resting_potential_mv: -52.0
|
|
reset_potential_mv: -52.0
|
|
threshold_mv: -45.0
|
|
synaptic_delay_ms: 1.8
|
|
w_syn_mv_per_anatomical_synapse: 0.275
|
|
|
|
sign_policy:
|
|
neurotransmitter_sign: {acetylcholine: 1, gaba: -1, glutamate: -1, dopamine: 1, octopamine: 1, serotonin: 1, histamine: -1}
|
|
unknown_sign: 0
|
|
unclear_sign: 0
|
|
|
|
dataset:
|
|
patterns: [left-spot, right-spot, upper-spot, lower-spot, left-to-right, right-to-left, up-to-down, down-to-up, looming, sparse-moving-object, static-object, full-field]
|
|
train_stimulus_seeds: [47001, 47002, 47003, 47004, 47005]
|
|
evaluation_stimulus_seeds: [47101, 47102, 47103]
|
|
biological_windows_ms: [10, 20, 30, 50, 100]
|
|
temporal_segments: 5
|
|
targets_per_segment: 460
|
|
poisson_rate_hz: 50.0
|
|
external_drive_mv: 8.8
|
|
tasks:
|
|
left-right: {patterns: [left-spot, right-spot], labels: [0, 1], classes: 2}
|
|
up-down: {patterns: [upper-spot, lower-spot], labels: [0, 1], classes: 2}
|
|
moving-static: {patterns: [sparse-moving-object, static-object], labels: [0, 1], classes: 2}
|
|
looming-translation: {patterns: [looming, left-to-right], labels: [0, 1], classes: 2}
|
|
spatial-4way: {patterns: [left-spot, right-spot, upper-spot, lower-spot], labels: [0, 1, 2, 3], classes: 4}
|
|
motion-4way: {patterns: [left-to-right, right-to-left, up-to-down, down-to-up], labels: [0, 1, 2, 3], classes: 4}
|
|
|
|
training:
|
|
model_seeds: [47201, 47202, 47203, 47204, 47205]
|
|
evaluation_seeds: [47101, 47102, 47103]
|
|
epochs: 120
|
|
learning_rate: 0.02
|
|
capacities:
|
|
Tiny: {feature_bins: 32, decoder: linear, encoder_parameters: 2}
|
|
Small: {feature_bins: 128, decoder: mlp, hidden: 16, encoder_parameters: 24}
|
|
abstract_actions: 4
|
|
|
|
controls:
|
|
graph_seed: 47300
|
|
graphs: [real-malecns, shuffled-edges, degree-preserving, brain-bypass]
|
|
shuffled_definition: independent uniform target per existing CSR edge slot; source degrees and edge count preserved
|
|
degree_preserving_definition: global permutation of original target array; exact source out-degree and target in-degree preserved
|
|
|
|
robustness:
|
|
task: spatial-4way
|
|
conditions: [input-noise, event-dropout, neuron-dropout, adapter-noise, partial-occlusion, temporal-jitter]
|
|
perturbation_fraction: 0.15
|
|
|
|
readout:
|
|
bins_ms: [1, 5, 10, 20, 50]
|
|
|
|
regression:
|
|
float_absolute_tolerance: 0.00390625
|
|
reference_trials:
|
|
- {name: auditory-10hz, population: auditory, rate_hz: 10, seed: 42001, duration_ms: 1000.0}
|
|
- {name: auditory-100hz, population: auditory, rate_hz: 100, seed: 42001, duration_ms: 1000.0}
|
|
- {name: olfactory-50hz, population: olfactory, rate_hz: 50, seed: 42003, duration_ms: 1000.0}
|
|
- {name: mechanosensory-50hz, population: mechanosensory, rate_hz: 50, seed: 42003, duration_ms: 1000.0}
|
|
- {name: gustatory-50hz, population: gustatory, rate_hz: 50, seed: 42003, duration_ms: 1000.0}
|
|
|
|
success_gate:
|
|
stable_accuracy_margin_over_chance: 0.10
|
|
successful_model_seed_majority: 3
|
|
require_descending_or_motor_information: true
|
|
require_control_difference: true
|
|
bypass_too_easy_accuracy: 0.95
|
|
|
|
prohibitions:
|
|
brain_backpropagation: false
|
|
connectome_changes: false
|
|
transmitter_sign_changes: false
|
|
brain_gain_changes: false
|
|
internal_weight_changes: false
|
|
lif_parameter_changes: false
|
|
game_rom: false
|
|
stable_retro: false
|
|
reinforcement_learning: false
|
|
dopamine_stdp: false
|
|
web_server: false
|
|
three_d_frontend: false
|