Digital Drosophila Archive
41 lines
1.7 KiB
Python
41 lines
1.7 KiB
Python
import hashlib
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import json
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from pathlib import Path
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MODEL=Path(__file__).resolve().parent
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ROOT=Path('/data/digital-drosophila')
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EXP=ROOT/'experiments/phase4ae-author-runtime'
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AD=ROOT/'experiments/phase4ad-author-semantics'
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CFG=json.loads((MODEL/'config.json').read_text())
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def digest(path):
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h=hashlib.sha256()
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with Path(path).open('rb') as f:
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for b in iter(lambda:f.read(8<<20),b''):h.update(b)
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return h.hexdigest()
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def save(path,value):
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path=Path(path);path.parent.mkdir(parents=True,exist_ok=True)
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with path.open('x',encoding='utf-8') as f:json.dump(value,f,indent=2,ensure_ascii=False,allow_nan=False);f.write('\n')
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def sources():
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return {p.name:digest(p) for p in sorted(MODEL.iterdir()) if p.is_file() and p.name not in ('manifest.json','checksums.sha256')}
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def check():
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p=json.loads((EXP/'protocol/preregistered.json').read_text())
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assert sources()==p['sources'],'Source changed after preregistration'
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for row in p['inputs']:assert digest(ROOT/row['path'])==row['sha256'],row['path']
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for row in json.loads((EXP/'protocol/case-hashes.json').read_text()):assert digest(EXP/row['path'])==row['sha256'],row['path']
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return p
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def integrity():
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import sys
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sys.path.insert(0,str(ROOT/'models/male-cns-lif/lif-semantics-audit-v1'))
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import audit_semantics as old
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r=old.integrity()
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for rel in ('models/male-cns-lif/lif-semantics-audit-v1','experiments/phase4ac-lif-semantics',
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'registry/feedback-context-review-20260930','models/male-cns-lif/author-semantics-lab-v1','experiments/phase4ad-author-semantics'):
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r[rel]=old.manifest_check(ROOT/rel,digest)
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assert all(x['pass'] for x in r.values())
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return r
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