Audit APL PN scope and localize official synaptic contacts without changing frozen dynamics

2026-09-29 23:58:05 +08:00
parent 3981628ff8
commit d6843e675d
62 changed files with 3974 additions and 0 deletions
@@ -0,0 +1,66 @@
+{
+  "APL_PN_contacts": 4600,
+  "APL_PN_edges": 268,
+  "APL_target_PNs": 259,
+  "ComfyUI_stopped_or_unloaded": false,
+  "ROI_unspecified_contacts": 731,
+  "bouton_identity_confirmed": false,
+  "brain_dynamics_changed": false,
+  "calyx_contacts": 3820,
+  "calyx_fraction": 0.8304347826086956,
+  "candidate": false,
+  "canonical_edges": 25582938,
+  "canonical_neurons": 166700,
+  "complete_pair_checks": {
+    "groups": [
+      {
+        "complete_pair_set_and_weight_exact": true,
+        "expected_CSR_pairs": 12027,
+        "group": "APL-incident",
+        "observed_pairs": 12027
+      },
+      {
+        "complete_pair_set_and_weight_exact": true,
+        "expected_CSR_pairs": 21978,
+        "group": "APL-target-PN-to-KC",
+        "observed_pairs": 21978
+      },
+      {
+        "complete_pair_set_and_weight_exact": true,
+        "expected_CSR_pairs": 823,
+        "group": "watched-PN-to-ALLN",
+        "observed_pairs": 823
+      },
+      {
+        "complete_pair_set_and_weight_exact": true,
+        "expected_CSR_pairs": 886,
+        "group": "ALLN-to-watched-PN",
+        "observed_pairs": 886
+      }
+    ],
+    "pass": true
+  },
+  "external_MD5_pass": true,
+  "external_SHA256": "959d8ef4173b35382a3e6acfaf5167c795b6d10b877572d146af04e1b487bc07",
+  "failures_preserved": [
+    "initial experiment-directory permission before any output",
+    "first GPU build lookup of Ninja failed before simulation",
+    "first aria2 checksum argument invalid before download"
+  ],
+  "finalized_utc": "2026-09-29T15:56:36Z",
+  "frozen_trials_count": 5,
+  "frozen_trials_pass": true,
+  "old_file_integrity_pass": true,
+  "old_scientific_files_verified": 230239,
+  "old_static_audit_retained_without_overwrite": true,
+  "other_ROI_contacts": 49,
+  "phase": "4AA",
+  "previous_static_spatial_block_resolved_by_user_authorized_reference_data": true,
+  "receptor_or_terminal_gain_calibrated": false,
+  "status": "PASS-APL-PN-ANATOMICAL-LOCALIZATION / NO-DYNAMICS-CANDIDATE",
+  "top_level_gate_fraction": "5/10",
+  "training": false,
+  "watched_PN_contacts": 247,
+  "watched_calyx_contacts": 228,
+  "watched_unspecified_contacts": 19
+}
@@ -0,0 +1,6 @@
+{
+  "models_imported": false,
+  "path": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/phase4p_revalidate.py",
+  "same_as_Phase4Z": true,
+  "sha256": "c7e693a2da70acdce4f53af5c2853e52e8333acc93f88a46a5e8083eac639346"
+}
@@ -0,0 +1,15 @@
+{
+  "KC_targets_with_graded_input": 4063,
+  "input_matrix_shape": [
+    2,
+    166700
+  ],
+  "input_scale": 49.65891647338867,
+  "normalized_input_matrix_sha256": "528a5f6f5ffe424f323c5a44695db4a7cf32570709832eff2f37f49e85c92c3e",
+  "normalized_output_matrix_sha256": "0dcf02cdb7836ab72da32ac47f5682ca33e25f63a8a662a8452d4ea9d46babb9",
+  "output_matrix_shape": [
+    2,
+    4064
+  ],
+  "output_scale": 42.34836959838867
+}
@@ -0,0 +1,41 @@
+{
+  "ALPN_neurons": 686,
+  "APL_PN_pairs_with_confirmed_local_synapse_ROI": 0,
+  "APL_PN_pairs_with_confirmed_subcellular_target": 0,
+  "APL_PN_pairs_with_reverse_edge": 247,
+  "APL_incoming_contacts": 234025,
+  "APL_incoming_edges": 6185,
+  "APL_neurons": 2,
+  "APL_outgoing_contacts": 209912,
+  "APL_outgoing_edges": 5845,
+  "APL_target_PNs": 259,
+  "APL_to_PN_contacts": 4600,
+  "APL_to_PN_edges": 268,
+  "ComfyUI_models_unloaded": false,
+  "KC_neurons": 4064,
+  "Phase4Z_static_coverage_exact": true,
+  "candidate": false,
+  "frozen_integrity_pass": true,
+  "gpu_used": false,
+  "graph_edges": 25582938,
+  "incoming_contacts_not_used_by_graded_state": 18257,
+  "incoming_edges_not_used_by_graded_state": 1202,
+  "neurons": 166700,
+  "new_scientific_regression_run": false,
+  "new_simulation": false,
+  "non_KC_uncovered_contacts": 13712,
+  "non_KC_uncovered_edges": 1212,
+  "non_KC_uncovered_targets": 999,
+  "old_reference_files_rehashed": true,
+  "phase": "4AA",
+  "raw_APL_incident_canonical_edges_checked": 12027,
+  "raw_APL_incident_noncanonical_rows": 50386,
+  "raw_to_CSR_exact": true,
+  "status": "PASS-STATIC-SCOPE-AUDIT / BLOCKED-SPATIAL-PHYSIOLOGY",
+  "synapse_count_sum": 124177617,
+  "top_level_gates_passed": 5,
+  "top_level_gates_total": 10,
+  "watched_PN_contacts": 247,
+  "weights_changed": false,
+  "whole_cell_inhibition_repair_authorized_by_evidence": false
+}