qishizhe/digital-drosophila
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Seal Phase 4AJ fixed APL timing hypothesis audit

Browse Source
This commit is contained in:
Digital Drosophila Archive
2026-09-30 12:08:25 +08:00
parent 8d6b063aaf
commit cb6937666f
1992 changed files with 258416 additions and 10 deletions
Download Patch File Download Diff File Expand all files Collapse all files
registry/phase4aj-apl-timing/evidence/origin-audit/cal-physiological-05-s51103/output-hashes.json
+37
View File
@@ -0,0 +1,37 @@
[
{
"path": "ALLN-all-accepted-incoming.parquet",
"bytes": 8593750,
"sha256": "e75c709015adf71f0a7add48813ce3b2f295d7026013e43f408c18ab6bdbf4cc"
},
{
"path": "ALLN-population.parquet",
"bytes": 10431,
"sha256": "852b8156f6a4e0b84d18ce88b33e2ca499d56fff5a83801876a27b7afff29a6c"
},
{
"path": "ALLN-replay-final.npz",
"bytes": 19914,
"sha256": "0157cff02f14f8542c40e1668844b527bf0fe7abe8f38162b44fa85e0188e6a8"
},
{
"path": "ALLN-to-cohort-PN-witness-join.parquet",
"bytes": 18455,
"sha256": "353d126074d73c455ca9f2a9fc6bc59d6271ceec0c4bc614bedf0bfbf105ff34"
},
{
"path": "PN-population-and-cohort.parquet",
"bytes": 14281,
"sha256": "e7b6c90ca76b1f7d89d57cfedde77dc4f4959fa98f83d2a0374bc6bd370152c5"
},
{
"path": "cohort-all-source-antecedents.parquet",
"bytes": 14309,
"sha256": "61e95a23469cc5a8b5a0fd46a63b9a4f17ad604177c3dc25124c6380b8dbf46f"
},
{
"path": "summary.json",
"bytes": 8783,
"sha256": "5445154beeef8a5266786f0bd698232f68b782467f099c2a285f453697838512"
}
]
registry/phase4aj-apl-timing/evidence/origin-audit/cal-physiological-05-s51103/summary.json
+269
View File
@@ -0,0 +1,269 @@
{
"case": "cal-physiological-05-s51103",
"repeat": 0,
"mode": "physiological",
"odor_id": "OMSUIQOIVADKIM-YFKPBYRVSA-N",
"seed": 51103,
"pass_all": true,
"exact": {
"v": true,
"g": true,
"ref": true,
"counts": true,
"step": true,
"neuron_idx": true
},
"ALLN_replay": {
"callbacks": 1000,
"ALLN_targets": 420,
"due_events": 1061907,
"accepted_events": 610428,
"rejected_events": 451479,
"source_groups": {
"design_ALPN": {
"due": 43305,
"accepted": 21809,
"rejected": 21496,
"positive": 21658,
"negative": 151,
"zero": 0
},
"ALLN": {
"due": 658622,
"accepted": 398869,
"rejected": 259753,
"positive": 219342,
"negative": 122189,
"zero": 57338
},
"non_design_ALPN": {
"due": 294251,
"accepted": 153103,
"rejected": 141148,
"positive": 147407,
"negative": 5696,
"zero": 0
},
"ALON": {
"due": 6982,
"accepted": 4141,
"rejected": 2841,
"positive": 2035,
"negative": 2106,
"zero": 0
},
"other": {
"due": 42682,
"accepted": 23833,
"rejected": 18849,
"positive": 20429,
"negative": 673,
"zero": 2731
},
"ALIN": {
"due": 11822,
"accepted": 6551,
"rejected": 5271,
"positive": 4270,
"negative": 2281,
"zero": 0
},
"olfactory_sensory": {
"due": 4171,
"accepted": 2089,
"rejected": 2082,
"positive": 2089,
"negative": 0,
"zero": 0
},
"MBON": {
"due": 45,
"accepted": 13,
"rejected": 32,
"positive": 12,
"negative": 1,
"zero": 0
},
"dopamine_annotation_only": {
"due": 27,
"accepted": 20,
"rejected": 7,
"positive": 20,
"negative": 0,
"zero": 0
}
},
"graded_APL_h_zero": true,
"accepted_zero_weight_rows_preserved": true
},
"first_any_KC_tick": 126,
"earliest_tick": 45,
"pre_kc_stop_exclusive": 126,
"pre_kc_window_censored": false,
"matched_stop_exclusive": 45,
"cohort_before_first_KC": true,
"cohort_relation_to_first_KC": "before",
"cohort_neurons": 1,
"cohort_neuron_idx": [
3574
],
"cohort_body_id": [
13832
],
"never_active_PN": 139,
"never_active_non_design_PN": 139,
"window_source_accounting": {
"cohort_pre_KC_and_pre_first": {
"design_ALPN": {
"events": 3,
"positive_events": 3,
"negative_events": 0,
"positive_weight_SI": 0.102025,
"negative_abs_weight_SI": 0.0
}
},
"never_active_pre_KC": {
"ALIN": {
"events": 33,
"positive_events": 33,
"negative_events": 0,
"positive_weight_SI": 0.022825,
"negative_abs_weight_SI": 0.0
},
"ALLN": {
"events": 4685,
"positive_events": 2962,
"negative_events": 1723,
"positive_weight_SI": 3.745775,
"negative_abs_weight_SI": 7.539125
},
"ALON": {
"events": 57,
"positive_events": 0,
"negative_events": 57,
"positive_weight_SI": 0.0,
"negative_abs_weight_SI": 0.15757500000000002
},
"design_ALPN": {
"events": 247,
"positive_events": 247,
"negative_events": 0,
"positive_weight_SI": 0.20955000000000001,
"negative_abs_weight_SI": 0.0
},
"non_design_ALPN": {
"events": 490,
"positive_events": 455,
"negative_events": 35,
"positive_weight_SI": 0.5687,
"negative_abs_weight_SI": 0.016775
},
"other": {
"events": 199,
"positive_events": 5,
"negative_events": 194,
"positive_weight_SI": 0.0033,
"negative_abs_weight_SI": 0.23842500000000003
},
"unclassified": {
"events": 3,
"positive_events": 0,
"negative_events": 3,
"positive_weight_SI": 0.0,
"negative_abs_weight_SI": 0.0011
}
},
"never_active_non_design_pre_KC": {
"ALIN": {
"events": 33,
"positive_events": 33,
"negative_events": 0,
"positive_weight_SI": 0.022825,
"negative_abs_weight_SI": 0.0
},
"ALLN": {
"events": 4685,
"positive_events": 2962,
"negative_events": 1723,
"positive_weight_SI": 3.745775,
"negative_abs_weight_SI": 7.539125
},
"ALON": {
"events": 57,
"positive_events": 0,
"negative_events": 57,
"positive_weight_SI": 0.0,
"negative_abs_weight_SI": 0.15757500000000002
},
"design_ALPN": {
"events": 247,
"positive_events": 247,
"negative_events": 0,
"positive_weight_SI": 0.20955000000000001,
"negative_abs_weight_SI": 0.0
},
"non_design_ALPN": {
"events": 490,
"positive_events": 455,
"negative_events": 35,
"positive_weight_SI": 0.5687,
"negative_abs_weight_SI": 0.016775
},
"other": {
"events": 199,
"positive_events": 5,
"negative_events": 194,
"positive_weight_SI": 0.0033,
"negative_abs_weight_SI": 0.23842500000000003
},
"unclassified": {
"events": 3,
"positive_events": 0,
"negative_events": 3,
"positive_weight_SI": 0.0,
"negative_abs_weight_SI": 0.0011
}
},
"never_active_matched_cohort_window": {
"design_ALPN": {
"events": 38,
"positive_events": 38,
"negative_events": 0,
"positive_weight_SI": 0.033825,
"negative_abs_weight_SI": 0.0
}
},
"never_active_non_design_matched_cohort_window": {
"design_ALPN": {
"events": 38,
"positive_events": 38,
"negative_events": 0,
"positive_weight_SI": 0.033825,
"negative_abs_weight_SI": 0.0
}
}
},
"AI_antecedent_rows_checked": 244644,
"cohort_ALLN_outgoing_events": 0,
"outgoing_events_with_since_reset_design_antecedent": 0,
"outgoing_events_without_since_reset_design_antecedent": 0,
"compact_join_pair_count": 0,
"no_direct_antecedent_is_not_unexplained_wholebrain": true,
"join_contract": "same trial; incoming.target_neuron_idx=outgoing.source_neuron_idx; incoming.source_group=design_ALPN; incoming.weight_SI != 0; outgoing.ALLN_previous_spike_tick < incoming.arrival_tick < outgoing.source_spike_tick; outgoing.arrival_tick < cohort first spike and first-any-KC cutoff; both legs exactly 18 ticks; all incoming rows accepted at ref=0; signs retained; zero legs not causal transmission",
"accounting_scope": "Accepted nominal SI weight sums, not membrane contribution, necessity or unique cause; prior-reset antecedents retained only as history; since-reset nonzero weights can still cancel/round away",
"window_scope": "Cohort first-spike antecedents are censored at their first spike; never-active pre-KC windows are longer. Use matched_cohort_window for duration-matched comparisons. If KC never fires, full trial is marked censored.",
"new_brain_simulation": false,
"GPU_used": false,
"candidate_generated": false,
"CAL_independent_ALLN_per_tick_history_available": false,
"input_sha256": {
"experiments/phase4ag-author-apl-r2/gpu/cal-physiological-05-s51103-r0/state.npz": "a523d22341a6f19f9a31d3484d06aacfafe05edc5920832496f7264b2a86ad93",
"experiments/phase4ag-author-apl-r2/gpu/cal-physiological-05-s51103-r0/summary.json": "18fbb76a6e82531265e1203abe8eee9d2c5d85908a241635fe6542ef0889314d",
"experiments/phase4ag-author-apl-r2/cases/cal-physiological-05-s51103/spec.json": "8489aad07ba6777434d0ff35ffe50d8552e3ed55453ec2be5ecbbf6e19517528",
"experiments/phase4ag-author-apl-r2/cases/cal-physiological-05-s51103/requests.npz": "e796119ef9e63705c99d0abb26f0a73dfb641dd6b82f40a75702bf6b79d98e8e",
"experiments/phase4ag-author-apl-r2/cases/cal-physiological-05-s51103/pn-drive.npz": "7a75cf32538d617fc62c489c148c806a11dd954d2105b4ac14a5b2bb9d044c0d",
"experiments/phase4ai-pn-recruitment-audit/trials/cal-physiological-05-s51103-r0/accepted-prefirst-edge-events.parquet": "51c5e14d7dbc814d3e0d398106ef84a5e0a6ccbfb8a3a6001d235b8aa3d980e0",
"experiments/phase4ai-pn-recruitment-audit/trials/cal-physiological-05-s51103-r0/per-pn.parquet": "bb34084bb876334f5cb01533936466a1c0734f784d13642b01b34305d869f45d",
"experiments/phase4ai-pn-recruitment-audit/trials/cal-physiological-05-s51103-r0/summary.json": "54e0e9395f91813e5995dea0357b311e7f8598bd1dac8d50a03794264e5dfe2e"
}
}