Seal Phase 4AJ fixed APL timing hypothesis audit

2026-09-30 12:08:25 +08:00
parent 8d6b063aaf
commit cb6937666f
1992 changed files with 258416 additions and 10 deletions
@@ -0,0 +1,77 @@
+{
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+  "author_sha256": "fc45837d7122c6ce2a7f3f2f23c515992e4b232aadb919efabb72337fac88e4e",
+  "bundle_hashes": {
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+    "kc_globals.npy": "97a570aafa089f93e642b2bb07e3a3322dabb14c3c7dd431f0c8d2b3b7951fdd",
+    "output_matrix.npy": "e2d0a1ccd740e6777245ebf2efcd88bf5e1da9e47308c63ec8e83d451e134a73"
+  },
+  "candidate_trace_used_as_input": false,
+  "case_hashes": {
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+    "spec.json": "acb231fe2f6ee50a48bdd9abb1fd7422d7a77b6a471ad4e5793ef9a4ba9f9c4c"
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+  "copied_oracle_sha256": "357a7d3debb5abc34a8714c0233b456547a154d9d5855d28661b4f01019a80ea",
+  "copied_oracle_source": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/oracle_apl.py",
+  "graph_hashes": {
+    "completeness.csv": "fb9033398abb7585ae63472ced9d8c8cab787f69965dc9ce5fa409ab105bc1bc",
+    "connectivity.parquet": "1362c1102b74f5552f4b01fca956574fd6252f749e31493c4a00a1bc9eab00b3",
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+    "edge_id.npy": "49260615ff2b6432ce3dea9ce2c7ab8f83d06c2fb7491e58e08355fcedf86a30",
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+    "src.npy": "bfd625ce690fc21eb0a8b9dede831688ab73b789045ba83ddf4baeefeddf1fc3",
+    "weights.npy": "462839ffc3feb8f6c278044488082b1c8e410e7f23229d6b5e29d1b7042416a1"
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+  "only_scientific_change": "transport generated graded-APL h before the unchanged end write",
+  "scope": "shared-APL-component closed-loop oracle, not all-components-independent CPU equivalence",
+  "spec": {
+    "apl": {
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+      "normalization": 1.0,
+      "tau_ms": 20.0
+    },
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+    "apl_delay_steps": 18,
+    "apl_precision": "float32",
+    "budget_root": "/data/digital-drosophila/experiments/phase4aj-apl-timing",
+    "coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
+    "dt_ms": 0.1,
+    "duration_ms": 100.0,
+    "expected_external_events": 105.90211181640625,
+    "graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
+    "kind": "calibration",
+    "legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
+    "mode": "physiological",
+    "model": {
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+      "membrane_tau_ms": 20.0,
+      "refractory_ms": 2.2,
+      "reset_potential_mv": -52.0,
+      "resting_potential_mv": -52.0,
+      "synaptic_delay_ms": 1.8,
+      "synaptic_tau_ms": 5.0,
+      "threshold_mv": -45.0,
+      "w_syn_mv_per_anatomical_synapse": 0.275
+    },
+    "name": "cal-physiological-00-s51101",
+    "odor_id": "OMSUIQOIVADKIM-RXMQYKEDSA-N",
+    "odor_index": 0,
+    "odor_name": "ethyl (R)-(-)-3-hydroxybutanoate",
+    "output_budget_bytes": 25769803776,
+    "precision": "float64",
+    "rate_sum_hz": 1059.0211181640625,
+    "record_history": false,
+    "science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
+    "seed": 51101,
+    "steps": 1000,
+    "target_count": 48,
+    "training": false
+  }
+}