Seal Phase 4AP isolated delta interface PASS, not learning

This commit is contained in:
Digital Drosophila Archive
2026-09-30 18:36:01 +08:00
parent 0bcce98332
commit b33e7ea047
360 changed files with 127513 additions and 3 deletions
@@ -0,0 +1,45 @@
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@@ -0,0 +1,37 @@
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@@ -0,0 +1,26 @@
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@@ -0,0 +1,12 @@
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@@ -0,0 +1,85 @@
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"state.npz": "3d7bd8be6127ad563262addcd3262471f6b964457c12f93b81415a6c5f15cc61",
"summary.json": "c05c9048b4c5c799d56e1435aff2e8c15ab620e2c1885fd07984a3dc0d1b74a1",
"terminal-queues.npz": "42dbeaa6f50c6d5e7492774393a2fcc8af775b682dd517a53535f6d7cd162c2c"
},
"global_next_tick": 1200,
"global_tick_offset": 0,
"pre_seal_state_integrity_independently_proven": false,
"schema": "phase4an-checkpoint-v1",
"segment_steps": 1200,
"state_binding_origin": "checkpoint seal; fresh runtime receipt did not hash state.npz"
}
@@ -0,0 +1,9 @@
{
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"all_finite": true,
"arriving_edges": 15867420,
"finite_observed_ticks": 1200,
"first_failure_tick": -1,
"mode": "light",
"scope": "every completed tick; no neuronal or APL tensor mutated by observer"
}
@@ -0,0 +1,40 @@
{
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],
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"sealed_source_sha256": {
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},
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"schema": "phase4an-overlay-install-v1",
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}
@@ -0,0 +1,14 @@
{
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"am_overlay_path": "/data/digital-drosophila/models/male-cns-lif/wholebrain-plastic-interface-v1/overlay.py",
"am_overlay_sha256": "7f891d0ba79b393c96e75fd2dee2eddc51e57d8213eaac2779703bc2c18712b4",
"base_candidate_path": "/data/digital-drosophila/experiments/phase4am-wholebrain-plastic-interface/protocol/base-candidate.float32-mV.npy",
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"mask_sha256": "8b0fb6eb2e6c31da4d17dc20d890aa3f367e514f05642de5bad6b42a1611c05b",
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"schema": "phase4an-overlay-v1"
}
@@ -0,0 +1,85 @@
{
"admission_bound_changed_explicitly": true,
"ast": {
"added_runtime_callbacks": [
"_runtime.install(weights, graph, apl_out_mask, upload, out_dir, source_provenance, device)",
"_runtime.finish(ring, apl_ring, apl, steps, out_dir)",
"_runtime.timing(steps, pending)",
"_runtime.after_tick(tick, v, g, ref, drive, apl_state, h, applied_h)",
"_runtime.arrivals(expanded, destination, ref)"
],
"admission_edit": "0 < steps <= 1000 -> 0 < steps <= spec.max_steps",
"aj_source_sha256": "af1975ba5e5e700208c0a598d3cbe648a3cf10885c6231239b6e4b28f76d173b",
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"derived_namespace_file": "/data/digital-drosophila/models/male-cns-lif/olfactory-conditioning-lab-v1/runtime_light.py",
"math_ast_sha256": "e46b7d037862b54c0000381ea50df3ba416c7c2c134e3cea78fa90ddf549f710",
"mathematical_ast_identical": true,
"mode": "light",
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"original_module_file": "/data/digital-drosophila/models/male-cns-lif/apl-timing-lab-v1/gpu_timing.py",
"output_metadata_binding": "new write_json only labels recording/within-trial scope; no old global mutated",
"post_loop_terminal_recording": "_runtime.finish(ring, apl_ring, apl, steps, out_dir)",
"pre_loop_installation": "_runtime.install(weights, graph, apl_out_mask, upload, out_dir, source_provenance, device)",
"reference_entire_tick_loop_identical": false,
"removed_diagnostic_statements": [
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"Assign(targets=[Name(id='expanded_global', ctx=Store())], value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='empty', ctx=Load()), args=[Constant(value=0)], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='int64', ctx=Load()))]))",
"Assign(targets=[Name(id='accepted_cpu', ctx=Store())], value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='empty', ctx=Load()), args=[Constant(value=0)], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='uint8', ctx=Load()))]))",
"Assign(targets=[Name(id='expanded_global', ctx=Store())], value=Call(func=Attribute(value=Subscript(value=Subscript(value=Name(id='graph', ctx=Load()), slice=Constant(value='edge_id'), ctx=Load()), slice=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='expanded', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), ctx=Load()), attr='copy', ctx=Load()), args=[], keywords=[]))",
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"Assign(targets=[Name(id='queue', ctx=Store())], value=Call(func=Name(id='queue_summary', ctx=Load()), args=[Name(id='tick', ctx=Load()), Name(id='expanded_global', ctx=Load()), Name(id='accepted_cpu', ctx=Load())], keywords=[]))",
"Expr(value=Call(func=Attribute(value=Name(id='queue_output', ctx=Load()), attr='write', ctx=Load()), args=[BinOp(left=Call(func=Attribute(value=Name(id='json', ctx=Load()), attr='dumps', ctx=Load()), args=[Name(id='queue', ctx=Load())], keywords=[keyword(arg='allow_nan', value=Constant(value=False))]), op=Add(), right=Constant(value='\\n'))], keywords=[]))",
"AugAssign(target=Name(id='due_total', ctx=Store()), op=Add(), value=Subscript(value=Name(id='queue', ctx=Load()), slice=Constant(value='count'), ctx=Load()))",
"AugAssign(target=Name(id='accepted_due_total', ctx=Store()), op=Add(), value=Subscript(value=Name(id='queue', ctx=Load()), slice=Constant(value='accepted_count'), ctx=Load()))",
"If(test=Subscript(value=Name(id='spec', ctx=Load()), slice=Constant(value='record_history'), ctx=Load()), body=[For(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Tuple(elts=[Tuple(elts=[Constant(value='v'), Name(id='v', ctx=Load())], ctx=Load()), Tuple(elts=[Constant(value='g'), Name(id='g', ctx=Load())], ctx=Load()), Tuple(elts=[Constant(value='ref'), Name(id='ref', ctx=Load())], ctx=Load())], ctx=Load()), body=[Assign(targets=[Subscript(value=Subscript(value=Name(id='maps', ctx=Load()), slice=BinOp(left=Constant(value='pre_'), op=Add(), right=Name(id='name', ctx=Load())), ctx=Load()), slice=Name(id='tick', ctx=Load()), ctx=Store())], value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='value', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]))], orelse=[])], orelse=[])",
"Assign(targets=[Name(id='apl_cpu', ctx=Store())], value=Dict(keys=[Constant(value='drive'), Constant(value='state'), Constant(value='inhibition'), Constant(value='applied')], values=[Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='drive', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='apl_state', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='h', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='applied_h', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[])]))",
"For(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), body=[Assign(targets=[Subscript(value=Subscript(value=Name(id='maps', ctx=Load()), slice=BinOp(left=Constant(value='apl_'), op=Add(), right=Name(id='name', ctx=Load())), ctx=Load()), slice=Name(id='tick', ctx=Load()), ctx=Store())], value=Name(id='value', ctx=Load()))], orelse=[])",
"Assign(targets=[Name(id='actual', ctx=Store())], value=Dict(keys=[Constant(value='v'), Constant(value='g'), Constant(value='ref')], values=[Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='v', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='g', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='ref', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[])]))",
"Assign(targets=[Name(id='finite', ctx=Store())], value=Call(func=Name(id='all', ctx=Load()), args=[GeneratorExp(elt=Call(func=Name(id='bool', ctx=Load()), args=[Call(func=Attribute(value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='isfinite', ctx=Load()), args=[Name(id='value', ctx=Load())], keywords=[]), attr='all', ctx=Load()), args=[], keywords=[])], keywords=[]), generators=[comprehension(target=Name(id='value', ctx=Store()), iter=BinOp(left=Call(func=Name(id='list', ctx=Load()), args=[Call(func=Attribute(value=Name(id='actual', ctx=Load()), attr='values', ctx=Load()), args=[], keywords=[])], keywords=[]), op=Add(), right=Call(func=Name(id='list', ctx=Load()), args=[Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='values', ctx=Load()), args=[], keywords=[])], keywords=[])), ifs=[], is_async=0)])], keywords=[]))",
"Assign(targets=[Name(id='row', ctx=Store())], value=Dict(keys=[Constant(value='tick'), None], values=[Name(id='tick', ctx=Load()), DictComp(key=BinOp(left=Name(id='name', ctx=Load()), op=Add(), right=Constant(value='_sha256')), value=Call(func=Name(id='raw_hash', ctx=Load()), args=[Name(id='value', ctx=Load()), IfExp(test=Compare(left=Name(id='name', ctx=Load()), ops=[Eq()], comparators=[Constant(value='ref')]), body=Constant(value='<i4'), orelse=Constant(value='<f8'))], keywords=[]), generators=[comprehension(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='actual', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), ifs=[], is_async=0)])]))",
"Expr(value=Call(func=Attribute(value=Name(id='hash_output', ctx=Load()), attr='write', ctx=Load()), args=[BinOp(left=Call(func=Attribute(value=Name(id='json', ctx=Load()), attr='dumps', ctx=Load()), args=[Name(id='row', ctx=Load())], keywords=[keyword(arg='allow_nan', value=Constant(value=False))]), op=Add(), right=Constant(value='\\n'))], keywords=[]))",
"If(test=Subscript(value=Name(id='spec', ctx=Load()), slice=Constant(value='record_history'), ctx=Load()), body=[For(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='actual', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), body=[Assign(targets=[Subscript(value=Subscript(value=Name(id='maps', ctx=Load()), slice=Name(id='name', ctx=Load()), ctx=Load()), slice=Name(id='tick', ctx=Load()), ctx=Store())], value=Name(id='value', ctx=Load()))], orelse=[])], orelse=[])",
"If(test=UnaryOp(op=Not(), operand=Name(id='finite', ctx=Load())), body=[With(items=[withitem(context_expr=Call(func=Attribute(value=BinOp(left=Name(id='out_dir', ctx=Load()), op=Div(), right=Constant(value='first-failure-state.npz')), attr='open', ctx=Load()), args=[Constant(value='xb')], keywords=[]), optional_vars=Name(id='target', ctx=Store()))], body=[Expr(value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='savez_compressed', ctx=Load()), args=[Name(id='target', ctx=Load())], keywords=[keyword(arg='tick', value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='array', ctx=Load()), args=[Name(id='tick', ctx=Load())], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='int32', ctx=Load()))])), keyword(value=Name(id='actual', ctx=Load())), keyword(value=DictComp(key=BinOp(left=Constant(value='apl_'), op=Add(), right=Name(id='name', ctx=Load())), value=Name(id='value', ctx=Load()), generators=[comprehension(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), ifs=[], is_async=0)]))]))]), Expr(value=Call(func=Name(id='require', ctx=Load()), args=[Constant(value=False), Constant(value='Nonfinite state; first failure saved')], keywords=[]))], orelse=[])"
],
"replaced_diagnostic_nodes": [
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"withitem(context_expr=Call(func=Attribute(value=BinOp(left=Name(id='out_dir', ctx=Load()), op=Div(), right=Constant(value='tick-state-hashes.jsonl')), attr='open', ctx=Load()), args=[Constant(value='x')], keywords=[keyword(arg='encoding', value=Constant(value='utf-8')), keyword(arg='buffering', value=Constant(value=1))]), optional_vars=Name(id='hash_output', ctx=Store()))",
"Assign(targets=[Name(id='timing', ctx=Store())], value=Call(func=Name(id='audit_sequence', ctx=Load()), args=[Subscript(value=Name(id='maps', ctx=Load()), slice=Constant(value='apl_inhibition'), ctx=Load()), Subscript(value=Name(id='maps', ctx=Load()), slice=Constant(value='apl_applied'), ctx=Load()), Name(id='pending', ctx=Load()), Name(id='apl_delay', ctx=Load())], keywords=[]))"
]
},
"complete": true,
"finite_audit_sha256": "5f0182167c4c628ec8fd6354a2fecde3dc99282894397aba155e7cb7e1fbce40",
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}
@@ -0,0 +1,37 @@
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}
@@ -0,0 +1,26 @@
{
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@@ -0,0 +1,9 @@
{
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}
@@ -0,0 +1,40 @@
{
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@@ -0,0 +1,12 @@
{
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@@ -0,0 +1,85 @@
{
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"source-audit.json": "d644f0265632f117bba0e045d26fb266765b1d005a89426b6242f3de034be935",
"state.npz": "137d5a73a869f27df8a3f97002ca6a683c80d3d715057759fb2aad64a05d37ff",
"summary.json": "e373b001d2b3e724b0723ddcb7fa0df85cef071a014c1c8d3f8f6ba7025d7642",
"terminal-queues.npz": "42dbeaa6f50c6d5e7492774393a2fcc8af775b682dd517a53535f6d7cd162c2c"
},
"global_next_tick": 1200,
"global_tick_offset": 0,
"pre_seal_state_integrity_independently_proven": false,
"schema": "phase4an-checkpoint-v1",
"segment_steps": 1200,
"state_binding_origin": "checkpoint seal; fresh runtime receipt did not hash state.npz"
}
@@ -0,0 +1,9 @@
{
"accepted_arriving_edges": 14570540,
"all_finite": true,
"arriving_edges": 15867420,
"finite_observed_ticks": 1200,
"first_failure_tick": -1,
"mode": "light",
"scope": "every completed tick; no neuronal or APL tensor mutated by observer"
}
@@ -0,0 +1,40 @@
{
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"bridge": "baseSI64 + (delta32 widened to float64) * float64(0.001); nonzero rows only",
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"delta_units": "mV",
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"inherited_AJ_provenance_only": {
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"diagnostic_additions": [
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"fixed-sequence bitwise audit",
"source provenance and final APL state disclosure"
],
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"only_dynamics_change": "fixed zero-initialized 0/18-step h32 delay before unchanged end g write",
"sealed_source_sha256": {
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"af_queue": "d72003d98f0f1624b12126eff50bd361c43d888f4a64d90ba9247a58976f1961",
"ag_gpu": "69f5d893f47dafff4ef7c3186c3df0b9014666b32c8f4e943b57016bec92b18a",
"ag_worker": "21ceec65fe42581dc55872010e0025d660e80358905f1cf4df1dadf341a3b291"
},
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},
"mask_sha256": "8b0fb6eb2e6c31da4d17dc20d890aa3f367e514f05642de5bad6b42a1611c05b",
"nonzero_delta_count": 90,
"overlay_name": "learned",
"parent_chain_verified_by_runtime": false,
"parent_snapshot_sha256": "0b219eab09c30dc3af31fef7e6395a9bec1234090abbb72db096da833fed82c5",
"schema": "phase4an-overlay-install-v1",
"state_dtype": "float64",
"weights_updated_during_run": false,
"zero_rows_untouched": true
}
@@ -0,0 +1,14 @@
{
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"am_overlay_path": "/data/digital-drosophila/models/male-cns-lif/wholebrain-plastic-interface-v1/overlay.py",
"am_overlay_sha256": "7f891d0ba79b393c96e75fd2dee2eddc51e57d8213eaac2779703bc2c18712b4",
"base_candidate_path": "/data/digital-drosophila/experiments/phase4am-wholebrain-plastic-interface/protocol/base-candidate.float32-mV.npy",
"base_candidate_sha256": "1218d1b328f29a7afefb0ca0b7b6421247f14ad598aa1957a6a7aacbc8cebcae",
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"mask_path": "/data/digital-drosophila/experiments/phase4h-dopamine-plasticity/plastic-mask/plastic-edge-ids.int64.npy",
"mask_sha256": "8b0fb6eb2e6c31da4d17dc20d890aa3f367e514f05642de5bad6b42a1611c05b",
"overlay_name": "learned",
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"schema": "phase4an-overlay-v1"
}
@@ -0,0 +1,85 @@
{
"admission_bound_changed_explicitly": true,
"ast": {
"added_runtime_callbacks": [
"_runtime.install(weights, graph, apl_out_mask, upload, out_dir, source_provenance, device)",
"_runtime.finish(ring, apl_ring, apl, steps, out_dir)",
"_runtime.timing(steps, pending)",
"_runtime.after_tick(tick, v, g, ref, drive, apl_state, h, applied_h)",
"_runtime.arrivals(expanded, destination, ref)"
],
"admission_edit": "0 < steps <= 1000 -> 0 < steps <= spec.max_steps",
"aj_source_sha256": "af1975ba5e5e700208c0a598d3cbe648a3cf10885c6231239b6e4b28f76d173b",
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"derived_namespace_file": "/data/digital-drosophila/models/male-cns-lif/olfactory-conditioning-lab-v1/runtime_light.py",
"math_ast_sha256": "e46b7d037862b54c0000381ea50df3ba416c7c2c134e3cea78fa90ddf549f710",
"mathematical_ast_identical": true,
"mode": "light",
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"original_module_file": "/data/digital-drosophila/models/male-cns-lif/apl-timing-lab-v1/gpu_timing.py",
"output_metadata_binding": "new write_json only labels recording/within-trial scope; no old global mutated",
"post_loop_terminal_recording": "_runtime.finish(ring, apl_ring, apl, steps, out_dir)",
"pre_loop_installation": "_runtime.install(weights, graph, apl_out_mask, upload, out_dir, source_provenance, device)",
"reference_entire_tick_loop_identical": false,
"removed_diagnostic_statements": [
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"Assign(targets=[Name(id='expanded_global', ctx=Store())], value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='empty', ctx=Load()), args=[Constant(value=0)], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='int64', ctx=Load()))]))",
"Assign(targets=[Name(id='accepted_cpu', ctx=Store())], value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='empty', ctx=Load()), args=[Constant(value=0)], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='uint8', ctx=Load()))]))",
"Assign(targets=[Name(id='expanded_global', ctx=Store())], value=Call(func=Attribute(value=Subscript(value=Subscript(value=Name(id='graph', ctx=Load()), slice=Constant(value='edge_id'), ctx=Load()), slice=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='expanded', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), ctx=Load()), attr='copy', ctx=Load()), args=[], keywords=[]))",
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"Assign(targets=[Name(id='queue', ctx=Store())], value=Call(func=Name(id='queue_summary', ctx=Load()), args=[Name(id='tick', ctx=Load()), Name(id='expanded_global', ctx=Load()), Name(id='accepted_cpu', ctx=Load())], keywords=[]))",
"Expr(value=Call(func=Attribute(value=Name(id='queue_output', ctx=Load()), attr='write', ctx=Load()), args=[BinOp(left=Call(func=Attribute(value=Name(id='json', ctx=Load()), attr='dumps', ctx=Load()), args=[Name(id='queue', ctx=Load())], keywords=[keyword(arg='allow_nan', value=Constant(value=False))]), op=Add(), right=Constant(value='\\n'))], keywords=[]))",
"AugAssign(target=Name(id='due_total', ctx=Store()), op=Add(), value=Subscript(value=Name(id='queue', ctx=Load()), slice=Constant(value='count'), ctx=Load()))",
"AugAssign(target=Name(id='accepted_due_total', ctx=Store()), op=Add(), value=Subscript(value=Name(id='queue', ctx=Load()), slice=Constant(value='accepted_count'), ctx=Load()))",
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"Assign(targets=[Name(id='apl_cpu', ctx=Store())], value=Dict(keys=[Constant(value='drive'), Constant(value='state'), Constant(value='inhibition'), Constant(value='applied')], values=[Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='drive', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='apl_state', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='h', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='applied_h', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[])]))",
"For(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), body=[Assign(targets=[Subscript(value=Subscript(value=Name(id='maps', ctx=Load()), slice=BinOp(left=Constant(value='apl_'), op=Add(), right=Name(id='name', ctx=Load())), ctx=Load()), slice=Name(id='tick', ctx=Load()), ctx=Store())], value=Name(id='value', ctx=Load()))], orelse=[])",
"Assign(targets=[Name(id='actual', ctx=Store())], value=Dict(keys=[Constant(value='v'), Constant(value='g'), Constant(value='ref')], values=[Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='v', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='g', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[]), Call(func=Attribute(value=Call(func=Attribute(value=Call(func=Attribute(value=Name(id='ref', ctx=Load()), attr='cpu', ctx=Load()), args=[], keywords=[]), attr='numpy', ctx=Load()), args=[], keywords=[]), attr='copy', ctx=Load()), args=[], keywords=[])]))",
"Assign(targets=[Name(id='finite', ctx=Store())], value=Call(func=Name(id='all', ctx=Load()), args=[GeneratorExp(elt=Call(func=Name(id='bool', ctx=Load()), args=[Call(func=Attribute(value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='isfinite', ctx=Load()), args=[Name(id='value', ctx=Load())], keywords=[]), attr='all', ctx=Load()), args=[], keywords=[])], keywords=[]), generators=[comprehension(target=Name(id='value', ctx=Store()), iter=BinOp(left=Call(func=Name(id='list', ctx=Load()), args=[Call(func=Attribute(value=Name(id='actual', ctx=Load()), attr='values', ctx=Load()), args=[], keywords=[])], keywords=[]), op=Add(), right=Call(func=Name(id='list', ctx=Load()), args=[Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='values', ctx=Load()), args=[], keywords=[])], keywords=[])), ifs=[], is_async=0)])], keywords=[]))",
"Assign(targets=[Name(id='row', ctx=Store())], value=Dict(keys=[Constant(value='tick'), None], values=[Name(id='tick', ctx=Load()), DictComp(key=BinOp(left=Name(id='name', ctx=Load()), op=Add(), right=Constant(value='_sha256')), value=Call(func=Name(id='raw_hash', ctx=Load()), args=[Name(id='value', ctx=Load()), IfExp(test=Compare(left=Name(id='name', ctx=Load()), ops=[Eq()], comparators=[Constant(value='ref')]), body=Constant(value='<i4'), orelse=Constant(value='<f8'))], keywords=[]), generators=[comprehension(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='actual', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), ifs=[], is_async=0)])]))",
"Expr(value=Call(func=Attribute(value=Name(id='hash_output', ctx=Load()), attr='write', ctx=Load()), args=[BinOp(left=Call(func=Attribute(value=Name(id='json', ctx=Load()), attr='dumps', ctx=Load()), args=[Name(id='row', ctx=Load())], keywords=[keyword(arg='allow_nan', value=Constant(value=False))]), op=Add(), right=Constant(value='\\n'))], keywords=[]))",
"If(test=Subscript(value=Name(id='spec', ctx=Load()), slice=Constant(value='record_history'), ctx=Load()), body=[For(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='actual', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), body=[Assign(targets=[Subscript(value=Subscript(value=Name(id='maps', ctx=Load()), slice=Name(id='name', ctx=Load()), ctx=Load()), slice=Name(id='tick', ctx=Load()), ctx=Store())], value=Name(id='value', ctx=Load()))], orelse=[])], orelse=[])",
"If(test=UnaryOp(op=Not(), operand=Name(id='finite', ctx=Load())), body=[With(items=[withitem(context_expr=Call(func=Attribute(value=BinOp(left=Name(id='out_dir', ctx=Load()), op=Div(), right=Constant(value='first-failure-state.npz')), attr='open', ctx=Load()), args=[Constant(value='xb')], keywords=[]), optional_vars=Name(id='target', ctx=Store()))], body=[Expr(value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='savez_compressed', ctx=Load()), args=[Name(id='target', ctx=Load())], keywords=[keyword(arg='tick', value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='array', ctx=Load()), args=[Name(id='tick', ctx=Load())], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='int32', ctx=Load()))])), keyword(value=Name(id='actual', ctx=Load())), keyword(value=DictComp(key=BinOp(left=Constant(value='apl_'), op=Add(), right=Name(id='name', ctx=Load())), value=Name(id='value', ctx=Load()), generators=[comprehension(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), ifs=[], is_async=0)]))]))]), Expr(value=Call(func=Name(id='require', ctx=Load()), args=[Constant(value=False), Constant(value='Nonfinite state; first failure saved')], keywords=[]))], orelse=[])"
],
"replaced_diagnostic_nodes": [
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"withitem(context_expr=Call(func=Attribute(value=BinOp(left=Name(id='out_dir', ctx=Load()), op=Div(), right=Constant(value='tick-state-hashes.jsonl')), attr='open', ctx=Load()), args=[Constant(value='x')], keywords=[keyword(arg='encoding', value=Constant(value='utf-8')), keyword(arg='buffering', value=Constant(value=1))]), optional_vars=Name(id='hash_output', ctx=Store()))",
"Assign(targets=[Name(id='timing', ctx=Store())], value=Call(func=Name(id='audit_sequence', ctx=Load()), args=[Subscript(value=Name(id='maps', ctx=Load()), slice=Constant(value='apl_inhibition'), ctx=Load()), Subscript(value=Name(id='maps', ctx=Load()), slice=Constant(value='apl_applied'), ctx=Load()), Name(id='pending', ctx=Load()), Name(id='apl_delay', ctx=Load())], keywords=[]))"
]
},
"complete": true,
"finite_audit_sha256": "5f0182167c4c628ec8fd6354a2fecde3dc99282894397aba155e7cb7e1fbce40",
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"/data/digital-drosophila/experiments/phase4am-wholebrain-plastic-interface/protocol/base-candidate.float32-mV.npy": "1218d1b328f29a7afefb0ca0b7b6421247f14ad598aa1957a6a7aacbc8cebcae",
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},
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"schema": "phase4an-checkpoint-v1",
"segment_steps": 1200,
"state_binding_origin": "checkpoint seal; fresh runtime receipt did not hash state.npz"
}
@@ -0,0 +1,9 @@
{
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"arriving_edges": 17655024,
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"first_failure_tick": -1,
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}
@@ -0,0 +1,40 @@
{
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},
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}
@@ -0,0 +1,12 @@
{
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"schema": "phase4an-overlay-v1"
}
@@ -0,0 +1,85 @@
{
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"ast": {
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"_runtime.finish(ring, apl_ring, apl, steps, out_dir)",
"_runtime.timing(steps, pending)",
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],
"admission_edit": "0 < steps <= 1000 -> 0 < steps <= spec.max_steps",
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"AugAssign(target=Name(id='accepted_due_total', ctx=Store()), op=Add(), value=Subscript(value=Name(id='queue', ctx=Load()), slice=Constant(value='accepted_count'), ctx=Load()))",
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"If(test=UnaryOp(op=Not(), operand=Name(id='finite', ctx=Load())), body=[With(items=[withitem(context_expr=Call(func=Attribute(value=BinOp(left=Name(id='out_dir', ctx=Load()), op=Div(), right=Constant(value='first-failure-state.npz')), attr='open', ctx=Load()), args=[Constant(value='xb')], keywords=[]), optional_vars=Name(id='target', ctx=Store()))], body=[Expr(value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='savez_compressed', ctx=Load()), args=[Name(id='target', ctx=Load())], keywords=[keyword(arg='tick', value=Call(func=Attribute(value=Name(id='np', ctx=Load()), attr='array', ctx=Load()), args=[Name(id='tick', ctx=Load())], keywords=[keyword(arg='dtype', value=Attribute(value=Name(id='np', ctx=Load()), attr='int32', ctx=Load()))])), keyword(value=Name(id='actual', ctx=Load())), keyword(value=DictComp(key=BinOp(left=Constant(value='apl_'), op=Add(), right=Name(id='name', ctx=Load())), value=Name(id='value', ctx=Load()), generators=[comprehension(target=Tuple(elts=[Name(id='name', ctx=Store()), Name(id='value', ctx=Store())], ctx=Store()), iter=Call(func=Attribute(value=Name(id='apl_cpu', ctx=Load()), attr='items', ctx=Load()), args=[], keywords=[]), ifs=[], is_async=0)]))]))]), Expr(value=Call(func=Name(id='require', ctx=Load()), args=[Constant(value=False), Constant(value='Nonfinite state; first failure saved')], keywords=[]))], orelse=[])"
],
"replaced_diagnostic_nodes": [
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]
},
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@@ -0,0 +1,85 @@
{
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"ast": {
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