qishizhe/digital-drosophila
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Seal Phase 4AP isolated delta interface PASS, not learning

Browse Source
This commit is contained in:
Digital Drosophila Archive
2026-09-30 18:36:01 +08:00
parent 0bcce98332
commit b33e7ea047
360 changed files with 127513 additions and 3 deletions
Download Patch File Download Diff File Expand all files Collapse all files
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--light--epoch-000/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D0--light--epoch-000/spec.json",
"original_spec_sha256": "51719e24ec20dec308e6f5d4458597924854c256ab8df8492bfd582d788a69b4"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--light--epoch-000/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 5717173809506784725,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D0--light--epoch-000",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D0",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/000",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--light--epoch-001/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D0--light--epoch-001/spec.json",
"original_spec_sha256": "b43e64317758e286d5cdc04f5b2e12f1e1455ea7b3cdbe6915058b622df48370"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--light--epoch-001/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 4342084263790487177,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D0--light--epoch-001",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D0",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/001",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--reference--epoch-000/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D0--reference--epoch-000/spec.json",
"original_spec_sha256": "634c9d1c82c5d3b3db9ee16b10bb002e826f59c8c113ed0c7154048af07b5443"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--reference--epoch-000/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 5717173809506784725,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D0--reference--epoch-000",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D0",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/000",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--reference--epoch-001/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D0--reference--epoch-001/spec.json",
"original_spec_sha256": "3eee26775d69a07440a870208c3248162428a544e6cfe4d367c59ba6c5fb472f"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D0--reference--epoch-001/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 4342084263790487177,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D0--reference--epoch-001",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D0",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/001",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D1--light--epoch-000/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D1--light--epoch-000/spec.json",
"original_spec_sha256": "d2f2fdd39221f0b0cb463e9f4aca1dd0092c5c07d403b18d9023eae8fb6fba33"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D1--light--epoch-000/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 5717173809506784725,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D1--light--epoch-000",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D1",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/000",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D1--light--epoch-001/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D1--light--epoch-001/spec.json",
"original_spec_sha256": "c07d708e14b1037c1c19f5e6a75b7a12313a2711440aaf70e811a9f01d3ff150"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D1--light--epoch-001/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 4342084263790487177,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D1--light--epoch-001",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D1",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/001",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D1--reference--epoch-001/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/D1--reference--epoch-001/spec.json",
"original_spec_sha256": "2cecab5340374700cfd286f7c5a30378e46406b91d47f59b6514b2cf4a4cbaaf"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/D1--reference--epoch-001/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 4342084263790487177,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "D1--reference--epoch-001",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "D1",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/001",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--light--epoch-000/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/frozen--light--epoch-000/spec.json",
"original_spec_sha256": "90abd2e7381e46ca62f919f2cd730fc7a64f56b9a63cc6da6ae5bbe0d2cc1a62"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--light--epoch-000/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 5717173809506784725,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "frozen--light--epoch-000",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "frozen",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/000",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--light--epoch-001/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/frozen--light--epoch-001/spec.json",
"original_spec_sha256": "abecea5bb3c0fc3af4f063a5539898619c5525522332607192cc3675fcb092da"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--light--epoch-001/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 4342084263790487177,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "frozen--light--epoch-001",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "frozen",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/001",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--reference--epoch-000/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/frozen--reference--epoch-000/spec.json",
"original_spec_sha256": "83687a73dcab90bcee71c279f81dfae16713107e305144c9468acb56bc803f02"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--reference--epoch-000/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 5717173809506784725,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "frozen--reference--epoch-000",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "frozen",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/000",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--reference--epoch-001/derivation.json
+12
View File
@@ -0,0 +1,12 @@
{
"all_other_fields_exact": true,
"changes": {
"budget_root": {
"after": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"before": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface"
}
},
"no_neural_parameter_change": true,
"original_spec": "/data/digital-drosophila/experiments/phase4ao-conditioning-interface/cases/frozen--reference--epoch-001/spec.json",
"original_spec_sha256": "2fc4189eb40b2e68b4c5472665398f4a20f60ae0016cbacdccad4375a283ff0b"
}
registry/phase4ap-conditioning-interface-v2/evidence/cases/frozen--reference--epoch-001/spec.json
+55
View File
@@ -0,0 +1,55 @@
{
"CS_window": [
0,
1000
],
"apl": {
"gain": 0.01,
"normalization": 1.0,
"tau_ms": 20.0
},
"apl_bundle_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/apl-bundle",
"apl_delay_steps": 18,
"apl_precision": "float32",
"budget_root": "/data/digital-drosophila/experiments/phase4ap-conditioning-interface-v2",
"coefficients_path": "/data/digital-drosophila/experiments/phase4af-author-fullgraph/oracle/no_input/coefficients.json",
"cs_input_seed": 4342084263790487177,
"cs_input_seed_bits": 63,
"dt_ms": 0.1,
"duration_ms": 120.0,
"expected_CS_requests": 75.04345290362835,
"graph_dir": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"kind": "fullgraph",
"legacy_apl_worker": "/data/digital-drosophila/models/male-cns-lif/author-apl-lab-v2/legacy_apl_worker.py",
"max_steps": 1200,
"mode": "physiological",
"model": {
"dt_ms": 0.1,
"membrane_tau_ms": 20.0,
"refractory_ms": 2.2,
"reset_potential_mv": -52.0,
"resting_potential_mv": -52.0,
"synaptic_delay_ms": 1.8,
"synaptic_tau_ms": 5.0,
"threshold_mv": -45.0,
"w_syn_mv_per_anatomical_synapse": 0.275
},
"name": "frozen--reference--epoch-001",
"odor_id": "HXDOZKJGKXYMEW-UHFFFAOYSA-N",
"odor_name": "4-ethylphenol",
"outer_arm": "frozen",
"outer_epoch_id": "physiological__PAM15__reinforce_A__rep01/normal/paired/001",
"outer_protocol": "conditioning_interface_preflight_not_full_conditioning",
"output_budget_bytes": 4294967296,
"precision": "float64",
"rate_sum_hz": 750.4344482421875,
"record_history": false,
"science_python": "/data/digital-drosophila/models/male-cns-lif/.venv/bin/python",
"seed": 1073741825,
"seed_scope": "seed is separate reset control; full cs_input_seed used only by saved-input sampler",
"source_panel_row": 9,
"source_panel_split": "heldout",
"steps": 1200,
"target_count": 26,
"within_trial_weight_updates": false
}