qishizhe/digital-drosophila
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Seal Phase 4AH conditional KC drive audit and source accounting

Browse Source
This commit is contained in:
Digital Drosophila Archive
2026-09-30 09:59:18 +08:00
parent ff91a74193
commit 9437bbff79
118 changed files with 53775 additions and 9 deletions
Download Patch File Download Diff File Expand all files Collapse all files
registry/phase4ah-kc-drive-audit/evidence/trials/cal-physiological-04-s51105-r0/summary.json
+550
View File
@@ -0,0 +1,550 @@
{
"strata": {
"all": {
"neurons": 4064,
"source_groups": {
"KC": {
"due_edges": 6975,
"accepted_edges": 6937,
"rejected_edges": 38,
"due_contacts": 10833,
"accepted_contacts": 10761,
"rejected_contacts": 72,
"accepted_exc_SI": 2.9592750000000003,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0198,
"rejected_inh_abs_SI": 0.0
},
"APL": {
"due_edges": 95149,
"accepted_edges": 95118,
"rejected_edges": 31,
"due_contacts": 4029774,
"accepted_contacts": 4028348,
"rejected_contacts": 1426,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"ALPN": {
"due_edges": 291603,
"accepted_edges": 291521,
"rejected_edges": 82,
"due_contacts": 5312301,
"accepted_contacts": 5310339,
"rejected_contacts": 1962,
"accepted_exc_SI": 1458.9630000000002,
"accepted_inh_abs_SI": 1.380225,
"rejected_exc_SI": 0.538725,
"rejected_inh_abs_SI": 0.000825
},
"MBON": {
"due_edges": 31750,
"accepted_edges": 31748,
"rejected_edges": 2,
"due_contacts": 60382,
"accepted_contacts": 60379,
"rejected_contacts": 3,
"accepted_exc_SI": 0.8973250000000002,
"accepted_inh_abs_SI": 15.706900000000001,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.000825
},
"anatomical_DAN": {
"due_edges": 95540,
"accepted_edges": 95539,
"rejected_edges": 1,
"due_contacts": 290620,
"accepted_contacts": 290617,
"rejected_contacts": 3,
"accepted_exc_SI": 79.88887499999998,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.000825,
"rejected_inh_abs_SI": 0.0
},
"dopamine_annotation_only": {
"due_edges": 45,
"accepted_edges": 45,
"rejected_edges": 0,
"due_contacts": 45,
"accepted_contacts": 45,
"rejected_contacts": 0,
"accepted_exc_SI": 0.012375,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"other": {
"due_edges": 187950,
"accepted_edges": 187887,
"rejected_edges": 63,
"due_contacts": 732605,
"accepted_contacts": 732358,
"rejected_contacts": 247,
"accepted_exc_SI": 88.523875,
"accepted_inh_abs_SI": 112.08807499999996,
"rejected_exc_SI": 0.0044,
"rejected_inh_abs_SI": 0.063525
},
"unclassified": {
"due_edges": 1,
"accepted_edges": 1,
"rejected_edges": 0,
"due_contacts": 2,
"accepted_contacts": 2,
"rejected_contacts": 0,
"accepted_exc_SI": 0.00055,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
}
},
"no_accepted_exc_neurons": 0,
"no_accepted_ALPN_exc_neurons": 267,
"has_exc_but_never_active": 4024,
"metrics_sum": {
"APL_write_SI": 4931.511350171737,
"APL_write_ref_SI": 0.8090326925814152,
"APL_write_available_SI": 4930.702317479156,
"APL_pre_first_spike_SI": 4886.875286514155,
"APL_same_tick_first_spike_SI": 0.03175583657622338,
"negative_g_ticks": 3800581.0,
"refractory_ticks": 946.0,
"g_end_time_integral_V_ms": -15959.632425826087,
"V_end_time_integral_V_ms": -31978.317875010274,
"accepted_exc_before_first_SI": 1601.6723250000005,
"accepted_inh_before_first_abs_SI": 127.53014999999996,
"APL_zeroed_due_edges": 95149.0,
"APL_zeroed_due_contacts": 4029774.0
},
"source_g_area_V_ms": {
"KC_exc": 14.872935973577166,
"KC_inh": 0.0,
"APL_exc": 0.0,
"APL_inh": 0.0,
"ALPN_exc": 6936.532255906479,
"ALPN_inh": -6.765582699220088,
"MBON_exc": 4.2358525872949615,
"MBON_inh": -74.10781835303894,
"anatomical_DAN_exc": 379.1842806884292,
"anatomical_DAN_inh": 0.0,
"dopamine_annotation_only_exc": 0.05613627476959117,
"dopamine_annotation_only_inh": 0.0,
"other_exc": 406.5610163366042,
"other_inh": -534.0168502615085,
"unclassified_exc": 0.00010891092703187155,
"unclassified_inh": 0.0,
"graded_APL": -23086.1847611904
},
"initial_g_state_area_V_ms": 0.0,
"source_g_area_residual_V_ms": -1.4894231681328307e-12,
"maximum_prethreshold_V": -0.04487246832635325,
"minimum_end_g_V": -0.3602240060643477
},
"ever_active": {
"neurons": 40,
"source_groups": {
"KC": {
"due_edges": 138,
"accepted_edges": 100,
"rejected_edges": 38,
"due_contacts": 243,
"accepted_contacts": 171,
"rejected_contacts": 72,
"accepted_exc_SI": 0.047025,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0198,
"rejected_inh_abs_SI": 0.0
},
"APL": {
"due_edges": 830,
"accepted_edges": 799,
"rejected_edges": 31,
"due_contacts": 38032,
"accepted_contacts": 36606,
"rejected_contacts": 1426,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"ALPN": {
"due_edges": 4415,
"accepted_edges": 4333,
"rejected_edges": 82,
"due_contacts": 118468,
"accepted_contacts": 116506,
"rejected_contacts": 1962,
"accepted_exc_SI": 32.033924999999996,
"accepted_inh_abs_SI": 0.0052250000000000005,
"rejected_exc_SI": 0.538725,
"rejected_inh_abs_SI": 0.000825
},
"MBON": {
"due_edges": 324,
"accepted_edges": 322,
"rejected_edges": 2,
"due_contacts": 659,
"accepted_contacts": 656,
"rejected_contacts": 3,
"accepted_exc_SI": 0.007425000000000001,
"accepted_inh_abs_SI": 0.172975,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.000825
},
"anatomical_DAN": {
"due_edges": 910,
"accepted_edges": 909,
"rejected_edges": 1,
"due_contacts": 2857,
"accepted_contacts": 2854,
"rejected_contacts": 3,
"accepted_exc_SI": 0.7848499999999999,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.000825,
"rejected_inh_abs_SI": 0.0
},
"dopamine_annotation_only": {
"due_edges": 0,
"accepted_edges": 0,
"rejected_edges": 0,
"due_contacts": 0,
"accepted_contacts": 0,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"other": {
"due_edges": 2328,
"accepted_edges": 2265,
"rejected_edges": 63,
"due_contacts": 9223,
"accepted_contacts": 8976,
"rejected_contacts": 247,
"accepted_exc_SI": 0.842325,
"accepted_inh_abs_SI": 1.6169999999999995,
"rejected_exc_SI": 0.0044,
"rejected_inh_abs_SI": 0.06352500000000001
},
"unclassified": {
"due_edges": 0,
"accepted_edges": 0,
"rejected_edges": 0,
"due_contacts": 0,
"accepted_contacts": 0,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
}
},
"no_accepted_exc_neurons": 0,
"no_accepted_ALPN_exc_neurons": 0,
"has_exc_but_never_active": 0,
"metrics_sum": {
"APL_write_SI": 46.206403376921905,
"APL_write_ref_SI": 0.8090326925814153,
"APL_write_available_SI": 45.397370684340494,
"APL_pre_first_spike_SI": 1.570339719340089,
"APL_same_tick_first_spike_SI": 0.03175583657622337,
"negative_g_ticks": 32035.0,
"refractory_ticks": 946.0,
"g_end_time_integral_V_ms": -70.5302804352461,
"V_end_time_integral_V_ms": -256.79517035226104,
"accepted_exc_before_first_SI": 4.1426,
"accepted_inh_before_first_abs_SI": 0.15015,
"APL_zeroed_due_edges": 830.0,
"APL_zeroed_due_contacts": 38032.0
},
"source_g_area_V_ms": {
"KC_exc": 0.16772615137752414,
"KC_inh": 0.0,
"APL_exc": 0.0,
"APL_inh": 0.0,
"ALPN_exc": 142.21838567533422,
"ALPN_inh": -0.024283976254220838,
"MBON_exc": 0.0333991405635638,
"MBON_inh": -0.8230730387166605,
"anatomical_DAN_exc": 3.6926461058876123,
"anatomical_DAN_inh": 0.0,
"dopamine_annotation_only_exc": 0.0,
"dopamine_annotation_only_inh": 0.0,
"other_exc": 3.8267111140161356,
"other_inh": -7.314316934283838,
"unclassified_exc": 0.0,
"unclassified_inh": 0.0,
"graded_APL": -212.30747467317042
},
"initial_g_state_area_V_ms": 0.0,
"source_g_area_residual_V_ms": 3.4024866257809094e-14,
"maximum_prethreshold_V": -0.04487246832635325,
"minimum_end_g_V": -0.09562890029114
},
"never_active": {
"neurons": 4024,
"source_groups": {
"KC": {
"due_edges": 6837,
"accepted_edges": 6837,
"rejected_edges": 0,
"due_contacts": 10590,
"accepted_contacts": 10590,
"rejected_contacts": 0,
"accepted_exc_SI": 2.9122500000000002,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"APL": {
"due_edges": 94319,
"accepted_edges": 94319,
"rejected_edges": 0,
"due_contacts": 3991742,
"accepted_contacts": 3991742,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"ALPN": {
"due_edges": 287188,
"accepted_edges": 287188,
"rejected_edges": 0,
"due_contacts": 5193833,
"accepted_contacts": 5193833,
"rejected_contacts": 0,
"accepted_exc_SI": 1426.929075,
"accepted_inh_abs_SI": 1.375,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"MBON": {
"due_edges": 31426,
"accepted_edges": 31426,
"rejected_edges": 0,
"due_contacts": 59723,
"accepted_contacts": 59723,
"rejected_contacts": 0,
"accepted_exc_SI": 0.8899000000000001,
"accepted_inh_abs_SI": 15.533925000000002,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"anatomical_DAN": {
"due_edges": 94630,
"accepted_edges": 94630,
"rejected_edges": 0,
"due_contacts": 287763,
"accepted_contacts": 287763,
"rejected_contacts": 0,
"accepted_exc_SI": 79.104025,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"dopamine_annotation_only": {
"due_edges": 45,
"accepted_edges": 45,
"rejected_edges": 0,
"due_contacts": 45,
"accepted_contacts": 45,
"rejected_contacts": 0,
"accepted_exc_SI": 0.012375,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"other": {
"due_edges": 185622,
"accepted_edges": 185622,
"rejected_edges": 0,
"due_contacts": 723382,
"accepted_contacts": 723382,
"rejected_contacts": 0,
"accepted_exc_SI": 87.68155,
"accepted_inh_abs_SI": 110.47107499999998,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"unclassified": {
"due_edges": 1,
"accepted_edges": 1,
"rejected_edges": 0,
"due_contacts": 2,
"accepted_contacts": 2,
"rejected_contacts": 0,
"accepted_exc_SI": 0.00055,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
}
},
"no_accepted_exc_neurons": 0,
"no_accepted_ALPN_exc_neurons": 267,
"has_exc_but_never_active": 4024,
"metrics_sum": {
"APL_write_SI": 4885.304946794815,
"APL_write_ref_SI": 0.0,
"APL_write_available_SI": 4885.304946794815,
"APL_pre_first_spike_SI": 4885.304946794815,
"APL_same_tick_first_spike_SI": 0.0,
"negative_g_ticks": 3768546.0,
"refractory_ticks": 0.0,
"g_end_time_integral_V_ms": -15889.102145390838,
"V_end_time_integral_V_ms": -31721.52270465801,
"accepted_exc_before_first_SI": 1597.5297250000006,
"accepted_inh_before_first_abs_SI": 127.37999999999997,
"APL_zeroed_due_edges": 94319.0,
"APL_zeroed_due_contacts": 3991742.0
},
"source_g_area_V_ms": {
"KC_exc": 14.705209822199642,
"KC_inh": 0.0,
"APL_exc": 0.0,
"APL_inh": 0.0,
"ALPN_exc": 6794.313870231144,
"ALPN_inh": -6.741298722965867,
"MBON_exc": 4.202453446731397,
"MBON_inh": -73.2847453143223,
"anatomical_DAN_exc": 375.49163458254156,
"anatomical_DAN_inh": 0.0,
"dopamine_annotation_only_exc": 0.05613627476959117,
"dopamine_annotation_only_inh": 0.0,
"other_exc": 402.7343052225881,
"other_inh": -526.7025333272247,
"unclassified_exc": 0.00010891092703187155,
"unclassified_inh": 0.0,
"graded_APL": -22873.87728651723
},
"initial_g_state_area_V_ms": 0.0,
"source_g_area_residual_V_ms": -1.5234480343906398e-12,
"maximum_prethreshold_V": -0.045031289904905944,
"minimum_end_g_V": -0.3602240060643477
}
},
"ledger_max_abs_error_V": 2.168404344971009e-19,
"ledger_max_bound_V": 6.692323050539088e-14,
"ledger_roundoff_bound_pass": true,
"ledger_accumulator_mantissa_bits": 63,
"ledger_bound_formula": "64 * eps(longdouble) * (ticks+1) * (sum_abs_actual_stage_deltas + abs(initial_g) + abs(final_g)) per KC",
"source_shadow_max_residual_V": 3.3306690738754696e-16,
"source_area_max_residual_V_ms": 2.842170943040401e-14,
"source_shadow_meaning": "Signed source/sign g bookkeeping under observed availability/reset only; non-feedback, not counterfactual",
"cumulative_increment_units": "SI volts; sums of individual increments, not instantaneous conductance",
"source_state_area_units": "V*ms; post-APL source-state left samples times dt .1ms",
"activity_strata_outcome_defined": true,
"APL_cause_of_CAL_failure_proven": false,
"full_CAL_all_tick_subset_state_independently_verified": false,
"case": "cal-physiological-04-s51105",
"repeat": 0,
"kind": "calibration",
"pass_all": true,
"exact": {
"v": true,
"g": true,
"ref": true,
"counts": true,
"step": true,
"neuron_idx": true
},
"full_KC_sparse_events_and_final_state_exact": true,
"every_tick_fixture_pre_post_state_exact": false,
"graph": {
"graph_name": "full",
"graph_nodes": 166700,
"graph_edges": 25582938,
"KC_targets": 4064,
"incoming_edges": 830465,
"incoming_contacts": 2082231,
"zeroed_APL_incoming_edges": 4633,
"groups": {
"KC": {
"edges": 642933,
"contacts": 1153845
},
"APL": {
"edges": 4633,
"contacts": 196200
},
"ALPN": {
"edges": 22586,
"contacts": 390928
},
"MBON": {
"edges": 6813,
"contacts": 11181
},
"anatomical_DAN": {
"edges": 129113,
"contacts": 225127
},
"dopamine_annotation_only": {
"edges": 35,
"contacts": 38
},
"other": {
"edges": 24211,
"contacts": 103979
},
"unclassified": {
"edges": 141,
"contacts": 933
}
},
"source_graph": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"conditional_target_filter_only": true,
"source_graph_modified": false
},
"input": {
"requests": 78,
"accepted": 53,
"rejected": 25,
"actual_spikes_by_source_group": {
"KC": 43,
"APL": 43,
"ALPN": 4906,
"MBON": 223,
"anatomical_DAN": 114,
"dopamine_annotation_only": 67,
"other": 21835,
"unclassified": 438
},
"all_ALPN": 686,
"odor_design_target_count": 48,
"PN_ever_requested": 21,
"PN_ever_accepted_request": 19,
"PN_actual_active": 543,
"design_target_PN_spikes": 520,
"non_design_ALPN_spikes": 4386,
"accepted_request_is_not_proof_spike_was_caused_exclusively_by_request": true,
"actual_requested_events_not_forced_to_equal_across_odors": true
},
"steps": 1000,
"duration_ms": 100.0,
"KC_active": 40,
"KC_spikes": 43,
"pending_after_record_window": {
"edge_events": 19126,
"contacts": 358717,
"nominal_abs_SI": 44.68337500000004
},
"mode": "physiological",
"odor_id": "XHIUFYZDQBSEMF-UHFFFAOYSA-N",
"seed": 51105,
"CPU_audit_wall_seconds": 1.8080360090007161,
"original_brain_time_and_wall_not_rebenchmarked": true,
"training": false,
"new_brain_simulation": false,
"candidate_generated": false,
"input_sha256": {
"state.npz": "0085f10ff4ec722f942f2a4c399b70b74a3fac8505158a075256fcaf5b675919",
"apl-inhibition.float32.npy": "4df822f15122c46c09d0a99cc82afec0e917ea83ce3aef3ee6a6a2ee5981dfbc",
"requests.csv": "d2e337754f4ea93e8ebb453007f4a261047e4b89c36b5d7cc0ad1f9d8835bd35",
"summary.json": "14bdabae663e04852ca2422527b6af787376af6339b7a8a37a00e111d3c52f66"
}
}