qishizhe/digital-drosophila
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Seal Phase 4AH conditional KC drive audit and source accounting

Browse Source
This commit is contained in:
Digital Drosophila Archive
2026-09-30 09:59:18 +08:00
parent ff91a74193
commit 9437bbff79
118 changed files with 53775 additions and 9 deletions
Download Patch File Download Diff File Expand all files Collapse all files
registry/phase4ah-kc-drive-audit/evidence/trials/cal-physiological-00-s51102-r0/summary.json
+550
View File
@@ -0,0 +1,550 @@
{
"strata": {
"all": {
"neurons": 4064,
"source_groups": {
"KC": {
"due_edges": 8223,
"accepted_edges": 8170,
"rejected_edges": 53,
"due_contacts": 13025,
"accepted_contacts": 12927,
"rejected_contacts": 98,
"accepted_exc_SI": 3.554925,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.02695,
"rejected_inh_abs_SI": 0.0
},
"APL": {
"due_edges": 104415,
"accepted_edges": 104386,
"rejected_edges": 29,
"due_contacts": 4422174,
"accepted_contacts": 4420958,
"rejected_contacts": 1216,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"ALPN": {
"due_edges": 311537,
"accepted_edges": 311435,
"rejected_edges": 102,
"due_contacts": 5674593,
"accepted_contacts": 5672194,
"rejected_contacts": 2399,
"accepted_exc_SI": 1558.3793500000002,
"accepted_inh_abs_SI": 1.4740000000000002,
"rejected_exc_SI": 0.659725,
"rejected_inh_abs_SI": 0.0
},
"MBON": {
"due_edges": 39320,
"accepted_edges": 39316,
"rejected_edges": 4,
"due_contacts": 75297,
"accepted_contacts": 75292,
"rejected_contacts": 5,
"accepted_exc_SI": 1.203675,
"accepted_inh_abs_SI": 19.501624999999997,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0013750000000000001
},
"anatomical_DAN": {
"due_edges": 121656,
"accepted_edges": 121650,
"rejected_edges": 6,
"due_contacts": 368677,
"accepted_contacts": 368669,
"rejected_contacts": 8,
"accepted_exc_SI": 101.353175,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0022,
"rejected_inh_abs_SI": 0.0
},
"dopamine_annotation_only": {
"due_edges": 37,
"accepted_edges": 37,
"rejected_edges": 0,
"due_contacts": 37,
"accepted_contacts": 37,
"rejected_contacts": 0,
"accepted_exc_SI": 0.010175,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"other": {
"due_edges": 192560,
"accepted_edges": 192487,
"rejected_edges": 73,
"due_contacts": 763540,
"accepted_contacts": 763297,
"rejected_contacts": 243,
"accepted_exc_SI": 99.1012,
"accepted_inh_abs_SI": 109.89192499999997,
"rejected_exc_SI": 0.00825,
"rejected_inh_abs_SI": 0.058025
},
"unclassified": {
"due_edges": 0,
"accepted_edges": 0,
"rejected_edges": 0,
"due_contacts": 0,
"accepted_contacts": 0,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
}
},
"no_accepted_exc_neurons": 0,
"no_accepted_ALPN_exc_neurons": 267,
"has_exc_but_never_active": 4017,
"metrics_sum": {
"APL_write_SI": 5350.589857415541,
"APL_write_ref_SI": 0.9791645382046701,
"APL_write_available_SI": 5349.610692877336,
"APL_pre_first_spike_SI": 5295.304690979106,
"APL_same_tick_first_spike_SI": 0.039331313610076905,
"negative_g_ticks": 3749998.0,
"refractory_ticks": 1100.0,
"g_end_time_integral_V_ms": -17423.37012748172,
"V_end_time_integral_V_ms": -33317.174369389206,
"accepted_exc_before_first_SI": 1726.3776750000006,
"accepted_inh_before_first_abs_SI": 128.91064999999998,
"APL_zeroed_due_edges": 104415.0,
"APL_zeroed_due_contacts": 4422174.0
},
"source_g_area_V_ms": {
"KC_exc": 17.87735119033961,
"KC_inh": 0.0,
"APL_exc": 0.0,
"APL_inh": 0.0,
"ALPN_exc": 7424.798094540258,
"ALPN_inh": -7.1107404153209295,
"MBON_exc": 5.628498360045463,
"MBON_inh": -89.9287654147722,
"anatomical_DAN_exc": 462.3669044007981,
"anatomical_DAN_inh": 0.0,
"dopamine_annotation_only_exc": 0.049740423151030166,
"dopamine_annotation_only_inh": 0.0,
"other_exc": 473.88199686348094,
"other_inh": -530.5951330461697,
"unclassified_exc": 0.0,
"unclassified_inh": 0.0,
"graded_APL": -25180.33807438353
},
"initial_g_state_area_V_ms": 0.0,
"source_g_area_residual_V_ms": -8.051267985642596e-13,
"maximum_prethreshold_V": -0.04489416117891853,
"minimum_end_g_V": -0.36503009970636835
},
"ever_active": {
"neurons": 47,
"source_groups": {
"KC": {
"due_edges": 183,
"accepted_edges": 130,
"rejected_edges": 53,
"due_contacts": 317,
"accepted_contacts": 219,
"rejected_contacts": 98,
"accepted_exc_SI": 0.060224999999999994,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.026949999999999998,
"rejected_inh_abs_SI": 0.0
},
"APL": {
"due_edges": 1068,
"accepted_edges": 1039,
"rejected_edges": 29,
"due_contacts": 47640,
"accepted_contacts": 46424,
"rejected_contacts": 1216,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"ALPN": {
"due_edges": 5564,
"accepted_edges": 5462,
"rejected_edges": 102,
"due_contacts": 148089,
"accepted_contacts": 145690,
"rejected_contacts": 2399,
"accepted_exc_SI": 40.05402499999999,
"accepted_inh_abs_SI": 0.010725000000000002,
"rejected_exc_SI": 0.6597249999999999,
"rejected_inh_abs_SI": 0.0
},
"MBON": {
"due_edges": 450,
"accepted_edges": 446,
"rejected_edges": 4,
"due_contacts": 936,
"accepted_contacts": 931,
"rejected_contacts": 5,
"accepted_exc_SI": 0.011275,
"accepted_inh_abs_SI": 0.24475,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.001375
},
"anatomical_DAN": {
"due_edges": 1390,
"accepted_edges": 1384,
"rejected_edges": 6,
"due_contacts": 4208,
"accepted_contacts": 4200,
"rejected_contacts": 8,
"accepted_exc_SI": 1.1549999999999994,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0022,
"rejected_inh_abs_SI": 0.0
},
"dopamine_annotation_only": {
"due_edges": 0,
"accepted_edges": 0,
"rejected_edges": 0,
"due_contacts": 0,
"accepted_contacts": 0,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"other": {
"due_edges": 2975,
"accepted_edges": 2902,
"rejected_edges": 73,
"due_contacts": 11342,
"accepted_contacts": 11099,
"rejected_contacts": 243,
"accepted_exc_SI": 1.1154,
"accepted_inh_abs_SI": 1.9216999999999993,
"rejected_exc_SI": 0.00825,
"rejected_inh_abs_SI": 0.058025
},
"unclassified": {
"due_edges": 0,
"accepted_edges": 0,
"rejected_edges": 0,
"due_contacts": 0,
"accepted_contacts": 0,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
}
},
"no_accepted_exc_neurons": 0,
"no_accepted_ALPN_exc_neurons": 0,
"has_exc_but_never_active": 0,
"metrics_sum": {
"APL_write_SI": 57.52558607614693,
"APL_write_ref_SI": 0.9791645382046699,
"APL_write_available_SI": 56.54642153794226,
"APL_pre_first_spike_SI": 2.2404196397131306,
"APL_same_tick_first_spike_SI": 0.039331313610076905,
"negative_g_ticks": 36660.0,
"refractory_ticks": 1100.0,
"g_end_time_integral_V_ms": -85.19812551911096,
"V_end_time_integral_V_ms": -305.4664208117643,
"accepted_exc_before_first_SI": 5.171099999999998,
"accepted_inh_before_first_abs_SI": 0.220275,
"APL_zeroed_due_edges": 1068.0,
"APL_zeroed_due_contacts": 47640.0
},
"source_g_area_V_ms": {
"KC_exc": 0.2300931663383154,
"KC_inh": 0.0,
"APL_exc": 0.0,
"APL_inh": 0.0,
"ALPN_exc": 179.49324265096382,
"ALPN_inh": -0.049460878393086154,
"MBON_exc": 0.05147147538580337,
"MBON_inh": -1.1336667672357397,
"anatomical_DAN_exc": 5.226987488430529,
"anatomical_DAN_inh": 0.0,
"dopamine_annotation_only_exc": 0.0,
"dopamine_annotation_only_inh": 0.0,
"other_exc": 5.282232233830518,
"other_inh": -8.753737529427314,
"unclassified_exc": 0.0,
"unclassified_inh": 0.0,
"graded_APL": -265.5452873590038
},
"initial_g_state_area_V_ms": 0.0,
"source_g_area_residual_V_ms": 1.2205514376972815e-14,
"maximum_prethreshold_V": -0.04489416117891853,
"minimum_end_g_V": -0.10146343818211662
},
"never_active": {
"neurons": 4017,
"source_groups": {
"KC": {
"due_edges": 8040,
"accepted_edges": 8040,
"rejected_edges": 0,
"due_contacts": 12708,
"accepted_contacts": 12708,
"rejected_contacts": 0,
"accepted_exc_SI": 3.4947,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"APL": {
"due_edges": 103347,
"accepted_edges": 103347,
"rejected_edges": 0,
"due_contacts": 4374534,
"accepted_contacts": 4374534,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"ALPN": {
"due_edges": 305973,
"accepted_edges": 305973,
"rejected_edges": 0,
"due_contacts": 5526504,
"accepted_contacts": 5526504,
"rejected_contacts": 0,
"accepted_exc_SI": 1518.325325,
"accepted_inh_abs_SI": 1.4632750000000003,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"MBON": {
"due_edges": 38870,
"accepted_edges": 38870,
"rejected_edges": 0,
"due_contacts": 74361,
"accepted_contacts": 74361,
"rejected_contacts": 0,
"accepted_exc_SI": 1.1924000000000001,
"accepted_inh_abs_SI": 19.256875,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"anatomical_DAN": {
"due_edges": 120266,
"accepted_edges": 120266,
"rejected_edges": 0,
"due_contacts": 364469,
"accepted_contacts": 364469,
"rejected_contacts": 0,
"accepted_exc_SI": 100.19817499999999,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"dopamine_annotation_only": {
"due_edges": 37,
"accepted_edges": 37,
"rejected_edges": 0,
"due_contacts": 37,
"accepted_contacts": 37,
"rejected_contacts": 0,
"accepted_exc_SI": 0.010175,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"other": {
"due_edges": 189585,
"accepted_edges": 189585,
"rejected_edges": 0,
"due_contacts": 752198,
"accepted_contacts": 752198,
"rejected_contacts": 0,
"accepted_exc_SI": 97.9858,
"accepted_inh_abs_SI": 107.97022499999997,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
},
"unclassified": {
"due_edges": 0,
"accepted_edges": 0,
"rejected_edges": 0,
"due_contacts": 0,
"accepted_contacts": 0,
"rejected_contacts": 0,
"accepted_exc_SI": 0.0,
"accepted_inh_abs_SI": 0.0,
"rejected_exc_SI": 0.0,
"rejected_inh_abs_SI": 0.0
}
},
"no_accepted_exc_neurons": 0,
"no_accepted_ALPN_exc_neurons": 267,
"has_exc_but_never_active": 4017,
"metrics_sum": {
"APL_write_SI": 5293.064271339394,
"APL_write_ref_SI": 0.0,
"APL_write_available_SI": 5293.064271339394,
"APL_pre_first_spike_SI": 5293.064271339394,
"APL_same_tick_first_spike_SI": 0.0,
"negative_g_ticks": 3713338.0,
"refractory_ticks": 0.0,
"g_end_time_integral_V_ms": -17338.17200196261,
"V_end_time_integral_V_ms": -33011.707948577445,
"accepted_exc_before_first_SI": 1721.2065750000006,
"accepted_inh_before_first_abs_SI": 128.69037499999996,
"APL_zeroed_due_edges": 103347.0,
"APL_zeroed_due_contacts": 4374534.0
},
"source_g_area_V_ms": {
"KC_exc": 17.647258024001296,
"KC_inh": 0.0,
"APL_exc": 0.0,
"APL_inh": 0.0,
"ALPN_exc": 7245.304851889294,
"ALPN_inh": -7.061279536927842,
"MBON_exc": 5.577026884659659,
"MBON_inh": -88.79509864753646,
"anatomical_DAN_exc": 457.13991691236754,
"anatomical_DAN_inh": 0.0,
"dopamine_annotation_only_exc": 0.049740423151030166,
"dopamine_annotation_only_inh": 0.0,
"other_exc": 468.59976462965034,
"other_inh": -521.8413955167425,
"unclassified_exc": 0.0,
"unclassified_inh": 0.0,
"graded_APL": -24914.79278702453
},
"initial_g_state_area_V_ms": 0.0,
"source_g_area_residual_V_ms": -8.173323129412324e-13,
"maximum_prethreshold_V": -0.04506292255049395,
"minimum_end_g_V": -0.36503009970636835
}
},
"ledger_max_abs_error_V": 2.168404344971009e-19,
"ledger_max_bound_V": 7.443039079880535e-14,
"ledger_roundoff_bound_pass": true,
"ledger_accumulator_mantissa_bits": 63,
"ledger_bound_formula": "64 * eps(longdouble) * (ticks+1) * (sum_abs_actual_stage_deltas + abs(initial_g) + abs(final_g)) per KC",
"source_shadow_max_residual_V": 3.885780586188048e-16,
"source_area_max_residual_V_ms": 3.197442310920451e-14,
"source_shadow_meaning": "Signed source/sign g bookkeeping under observed availability/reset only; non-feedback, not counterfactual",
"cumulative_increment_units": "SI volts; sums of individual increments, not instantaneous conductance",
"source_state_area_units": "V*ms; post-APL source-state left samples times dt .1ms",
"activity_strata_outcome_defined": true,
"APL_cause_of_CAL_failure_proven": false,
"full_CAL_all_tick_subset_state_independently_verified": false,
"case": "cal-physiological-00-s51102",
"repeat": 0,
"kind": "calibration",
"pass_all": true,
"exact": {
"v": true,
"g": true,
"ref": true,
"counts": true,
"step": true,
"neuron_idx": true
},
"full_KC_sparse_events_and_final_state_exact": true,
"every_tick_fixture_pre_post_state_exact": false,
"graph": {
"graph_name": "full",
"graph_nodes": 166700,
"graph_edges": 25582938,
"KC_targets": 4064,
"incoming_edges": 830465,
"incoming_contacts": 2082231,
"zeroed_APL_incoming_edges": 4633,
"groups": {
"KC": {
"edges": 642933,
"contacts": 1153845
},
"APL": {
"edges": 4633,
"contacts": 196200
},
"ALPN": {
"edges": 22586,
"contacts": 390928
},
"MBON": {
"edges": 6813,
"contacts": 11181
},
"anatomical_DAN": {
"edges": 129113,
"contacts": 225127
},
"dopamine_annotation_only": {
"edges": 35,
"contacts": 38
},
"other": {
"edges": 24211,
"contacts": 103979
},
"unclassified": {
"edges": 141,
"contacts": 933
}
},
"source_graph": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/full",
"conditional_target_filter_only": true,
"source_graph_modified": false
},
"input": {
"requests": 94,
"accepted": 68,
"rejected": 26,
"actual_spikes_by_source_group": {
"KC": 50,
"APL": 47,
"ALPN": 5223,
"MBON": 264,
"anatomical_DAN": 138,
"dopamine_annotation_only": 70,
"other": 23620,
"unclassified": 476
},
"all_ALPN": 686,
"odor_design_target_count": 48,
"PN_ever_requested": 33,
"PN_ever_accepted_request": 30,
"PN_actual_active": 545,
"design_target_PN_spikes": 567,
"non_design_ALPN_spikes": 4656,
"accepted_request_is_not_proof_spike_was_caused_exclusively_by_request": true,
"actual_requested_events_not_forced_to_equal_across_odors": true
},
"steps": 1000,
"duration_ms": 100.0,
"KC_active": 47,
"KC_spikes": 50,
"pending_after_record_window": {
"edge_events": 22328,
"contacts": 376817,
"nominal_abs_SI": 49.617974999999944
},
"mode": "physiological",
"odor_id": "OMSUIQOIVADKIM-RXMQYKEDSA-N",
"seed": 51102,
"CPU_audit_wall_seconds": 1.8278594339990377,
"original_brain_time_and_wall_not_rebenchmarked": true,
"training": false,
"new_brain_simulation": false,
"candidate_generated": false,
"input_sha256": {
"state.npz": "dacaf1a771ae717b2671b6bb04a5c580906cbe9775dd1d4312954f0199291937",
"apl-inhibition.float32.npy": "01662d1138b1d1defc5f8d6d3d9a829a0013f0b725fceee3fd75a5ceb2e96269",
"requests.csv": "7344d56530bdd9319bd6ecd347babbb901f43a8dbf31ce0b927b7e194f8da5a1",
"summary.json": "229a9c64886e74b30f3a6a60a109fdbd6baf9f4ec24570385f5a58a24ecdd0c6"
}
}