Archive MaleCNS research sources, provenance, bibliography and immutable data inventory
This commit is contained in:
Digital Drosophila Archive
@@ -0,0 +1,37 @@
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# Phase 4W — late KC feedback audit
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{"CPU_replay_exact": true, "candidate": false, "full_event_repeat_exact": true, "learning": false, "paths": 36, "phase": "4W", "prior_V_exact": true, "reference_pass": true, "rooted_time_supported_paths": 36, "status": "COMPLETE-CONDITIONAL-MECHANISM-AUDIT", "trials": 6, "whole_brain_causal_necessity_proven": false, "integrity_pass": true}
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No learning or model changes. Inputs replay six old Phase4V offset trials. All frozen source artifacts remain read-only.
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CPU single-cell omissions hold all other recorded arrivals and the applied APL overlay fixed. They are conditional input tests, not whole-brain causal interventions.
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Ancestry uses real edges and actual event timing. Ranking the largest positive decayed latest-spike contribution is a heuristic, not a unique causal explanation. All inhibitory arrivals and graded APL are retained in the separate drive audit.
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| neuron_idx | replay mode | mean late spikes (6 odors) |
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|---:|---|---:|
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| 59832 | base | 16.333 |
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| 59832 | omit_APL | 16.333 |
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| 59832 | omit_APL_overlay | 143.833 |
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| 59832 | omit_DAN | 0.000 |
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| 59832 | omit_KC | 15.167 |
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| 59832 | omit_MBON | 28.667 |
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| 59832 | omit_PN_olfactory | 0.000 |
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| 59832 | omit_other | 0.000 |
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| 78836 | base | 39.667 |
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| 78836 | omit_APL | 39.667 |
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| 78836 | omit_APL_overlay | 39.667 |
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| 78836 | omit_DAN | 0.000 |
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| 78836 | omit_KC | 39.000 |
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| 78836 | omit_MBON | 46.667 |
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| 78836 | omit_PN_olfactory | 39.667 |
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| 78836 | omit_other | 49.667 |
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| 82312 | base | 60.500 |
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| 82312 | omit_APL | 60.500 |
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| 82312 | omit_APL_overlay | 115.000 |
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| 82312 | omit_DAN | 59.000 |
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| 82312 | omit_KC | 60.500 |
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| 82312 | omit_MBON | 60.500 |
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| 82312 | omit_PN_olfactory | 0.000 |
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| 82312 | omit_other | 65.667 |
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The six reserved novel test odors remain untouched. No candidate, parameter selection, threshold/gain change, eligibility modification, training or game integration.
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Full evidence: drive/summary.parquet, replay/results.parquet, ancestry/event-supported-edges.parquet, regression/comparisons.json.
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@@ -0,0 +1,530 @@
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[
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 5,
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"neuron_idx": 59832,
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"root_node": 522,
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"root_step": 58,
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"status": "accepted_input_root",
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"trial": "0-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 170,
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"neuron_idx": 59832,
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"root_node": 360,
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"root_step": 14,
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"status": "accepted_input_root",
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"trial": "0-131101-offset"
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},
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{
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"categories": [
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"DAN",
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"KC",
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 13,
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"neuron_idx": 78836,
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"root_node": 360,
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"root_step": 14,
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"status": "accepted_input_root",
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"trial": "0-131101-offset"
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},
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{
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"categories": [
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"DAN",
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"KC",
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 171,
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"neuron_idx": 78836,
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"root_node": 360,
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"root_step": 14,
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"status": "accepted_input_root",
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"trial": "0-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 6,
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"neuron_idx": 82312,
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"root_node": 360,
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"root_step": 14,
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"status": "accepted_input_root",
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"trial": "0-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 229,
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"neuron_idx": 82312,
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"root_node": 360,
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"root_step": 14,
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"status": "accepted_input_root",
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"trial": "0-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 7,
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"neuron_idx": 59832,
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"root_node": 189,
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"root_step": 20,
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"status": "accepted_input_root",
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"trial": "1-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 163,
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"neuron_idx": 59832,
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"root_node": 360,
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"root_step": 70,
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"status": "accepted_input_root",
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"trial": "1-131101-offset"
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},
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{
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"categories": [
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"DAN",
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"KC",
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 10,
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"neuron_idx": 78836,
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"root_node": 360,
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"root_step": 70,
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"status": "accepted_input_root",
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"trial": "1-131101-offset"
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},
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{
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"categories": [
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"DAN",
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"KC",
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 166,
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"neuron_idx": 78836,
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"root_node": 360,
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"root_step": 70,
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"status": "accepted_input_root",
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"trial": "1-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 4,
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"neuron_idx": 82312,
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"root_node": 159,
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"root_step": 106,
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"status": "accepted_input_root",
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"trial": "1-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 225,
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"neuron_idx": 82312,
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"root_node": 360,
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"root_step": 70,
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"status": "accepted_input_root",
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"trial": "1-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 7,
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"neuron_idx": 59832,
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"root_node": 522,
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"root_step": 22,
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"status": "accepted_input_root",
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"trial": "2-131101-offset"
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},
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{
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"categories": [
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 172,
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"neuron_idx": 59832,
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"root_node": 522,
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"root_step": 22,
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"status": "accepted_input_root",
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"trial": "2-131101-offset"
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},
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{
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"categories": [
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"DAN",
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"KC",
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"PN_olfactory",
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"other"
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],
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"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first",
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"hops": 10,
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"neuron_idx": 78836,
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"root_node": 522,
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"root_step": 22,
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"status": "accepted_input_root",
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"trial": "2-131101-offset"
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},
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{
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"categories": [
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"DAN",
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"KC",
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"PN_olfactory",
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"other"
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],
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||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 170,
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||||
"neuron_idx": 78836,
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"root_node": 522,
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||||
"root_step": 22,
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||||
"status": "accepted_input_root",
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||||
"trial": "2-131101-offset"
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},
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||||
{
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||||
"categories": [
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||||
"PN_olfactory",
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"other"
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||||
],
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||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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||||
"endpoint": "first",
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||||
"hops": 7,
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||||
"neuron_idx": 82312,
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"root_node": 522,
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||||
"root_step": 22,
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||||
"status": "accepted_input_root",
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||||
"trial": "2-131101-offset"
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||||
},
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{
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||||
"categories": [
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||||
"PN_olfactory",
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"other"
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],
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||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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"endpoint": "first_late",
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"hops": 210,
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||||
"neuron_idx": 82312,
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"root_node": 522,
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"root_step": 22,
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||||
"status": "accepted_input_root",
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||||
"trial": "2-131101-offset"
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||||
},
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||||
{
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||||
"categories": [
|
||||
"PN_olfactory",
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||||
"other"
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||||
],
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||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
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||||
"endpoint": "first",
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||||
"hops": 7,
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||||
"neuron_idx": 59832,
|
||||
"root_node": 189,
|
||||
"root_step": 70,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "3-131101-offset"
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||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 175,
|
||||
"neuron_idx": 59832,
|
||||
"root_node": 2601,
|
||||
"root_step": 89,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "3-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"DAN",
|
||||
"KC",
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 12,
|
||||
"neuron_idx": 78836,
|
||||
"root_node": 189,
|
||||
"root_step": 70,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "3-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"DAN",
|
||||
"KC",
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 167,
|
||||
"neuron_idx": 78836,
|
||||
"root_node": 189,
|
||||
"root_step": 70,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "3-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 7,
|
||||
"neuron_idx": 82312,
|
||||
"root_node": 189,
|
||||
"root_step": 70,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "3-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 226,
|
||||
"neuron_idx": 82312,
|
||||
"root_node": 2601,
|
||||
"root_step": 89,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "3-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 7,
|
||||
"neuron_idx": 59832,
|
||||
"root_node": 999,
|
||||
"root_step": 57,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 167,
|
||||
"neuron_idx": 59832,
|
||||
"root_node": 999,
|
||||
"root_step": 57,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"DAN",
|
||||
"KC",
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 11,
|
||||
"neuron_idx": 78836,
|
||||
"root_node": 999,
|
||||
"root_step": 57,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"DAN",
|
||||
"KC",
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 172,
|
||||
"neuron_idx": 78836,
|
||||
"root_node": 999,
|
||||
"root_step": 57,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 7,
|
||||
"neuron_idx": 82312,
|
||||
"root_node": 999,
|
||||
"root_step": 57,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 223,
|
||||
"neuron_idx": 82312,
|
||||
"root_node": 999,
|
||||
"root_step": 57,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 51,
|
||||
"neuron_idx": 59832,
|
||||
"root_node": 159,
|
||||
"root_step": 68,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "5-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 170,
|
||||
"neuron_idx": 59832,
|
||||
"root_node": 159,
|
||||
"root_step": 68,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "5-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"DAN",
|
||||
"KC",
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 11,
|
||||
"neuron_idx": 78836,
|
||||
"root_node": 159,
|
||||
"root_step": 42,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "5-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"DAN",
|
||||
"KC",
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 164,
|
||||
"neuron_idx": 78836,
|
||||
"root_node": 159,
|
||||
"root_step": 42,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "5-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first",
|
||||
"hops": 6,
|
||||
"neuron_idx": 82312,
|
||||
"root_node": 159,
|
||||
"root_step": 42,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "5-131101-offset"
|
||||
},
|
||||
{
|
||||
"categories": [
|
||||
"PN_olfactory",
|
||||
"other"
|
||||
],
|
||||
"claim": "ranked time-supported ancestry only; not unique cause or whole-brain necessity",
|
||||
"endpoint": "first_late",
|
||||
"hops": 225,
|
||||
"neuron_idx": 82312,
|
||||
"root_node": 159,
|
||||
"root_step": 42,
|
||||
"status": "accepted_input_root",
|
||||
"trial": "5-131101-offset"
|
||||
}
|
||||
]
|
||||
@@ -0,0 +1,58 @@
|
||||
# Phase 4W mechanism summary
|
||||
|
||||
Descriptive audit; no learning, model parameter change, or candidate selection. Six previously seen odors, one fixed seed each; not independent population generalization.
|
||||
|
||||
| neuron_idx | body_id | actual annotation type |
|
||||
|---:|---:|---|
|
||||
| 59832 | 79362 | KCg-s3 |
|
||||
| 78836 | 104513 | KCg-d |
|
||||
| 82312 | 109321 | KC |
|
||||
|
||||
| neuron_idx | source class | fraction of positive late arrivals |
|
||||
|---:|---|---:|
|
||||
| 59832 | APL | 0.0000% |
|
||||
| 59832 | DAN | 23.9674% |
|
||||
| 59832 | KC | 0.2979% |
|
||||
| 59832 | MBON | 0.4567% |
|
||||
| 59832 | PN_olfactory | 60.4124% |
|
||||
| 59832 | other | 14.8655% |
|
||||
| 78836 | DAN | 91.3692% |
|
||||
| 78836 | KC | 0.8757% |
|
||||
| 78836 | MBON | 0.0000% |
|
||||
| 78836 | other | 7.7551% |
|
||||
| 82312 | APL | 0.0000% |
|
||||
| 82312 | DAN | 0.6249% |
|
||||
| 82312 | PN_olfactory | 99.3751% |
|
||||
| 82312 | other | 0.0000% |
|
||||
|
||||
| neuron_idx | isolated replay | late spike count range |
|
||||
|---:|---|---:|
|
||||
| 59832 | base | 15–17 |
|
||||
| 59832 | omit_APL | 15–17 |
|
||||
| 59832 | omit_APL_overlay | 143–144 |
|
||||
| 59832 | omit_DAN | 0–0 |
|
||||
| 59832 | omit_KC | 14–17 |
|
||||
| 59832 | omit_MBON | 28–30 |
|
||||
| 59832 | omit_PN_olfactory | 0–0 |
|
||||
| 59832 | omit_other | 0–0 |
|
||||
| 78836 | base | 39–40 |
|
||||
| 78836 | omit_APL | 39–40 |
|
||||
| 78836 | omit_APL_overlay | 39–40 |
|
||||
| 78836 | omit_DAN | 0–0 |
|
||||
| 78836 | omit_KC | 39–39 |
|
||||
| 78836 | omit_MBON | 46–47 |
|
||||
| 78836 | omit_PN_olfactory | 39–40 |
|
||||
| 78836 | omit_other | 49–50 |
|
||||
| 82312 | base | 60–61 |
|
||||
| 82312 | omit_APL | 60–61 |
|
||||
| 82312 | omit_APL_overlay | 115–115 |
|
||||
| 82312 | omit_DAN | 59–59 |
|
||||
| 82312 | omit_KC | 60–61 |
|
||||
| 82312 | omit_MBON | 60–61 |
|
||||
| 82312 | omit_PN_olfactory | 0–0 |
|
||||
| 82312 | omit_other | 65–66 |
|
||||
|
||||
Replay holds all other recorded drive and the measured applied APL signal fixed. Removing a source class is a conditional single-cell test, not a closed-loop whole-brain intervention.
|
||||
Drive fractions refer to delivered positive synaptic input, not fractions of biological causality or of net g. Inhibition and APL are separately accounted.
|
||||
Ranked ancestry uses positive edges only; inhibitory influences are not claimed absent. Ranking is a heuristic; all path edges have real source events and arrival<=target-spike time.
|
||||
Float64 category shadow max absolute residual versus actual float32 g: 1.76084011e-05. This does not alter the exact CPU replay or actual queue checks.
|
||||
@@ -0,0 +1,9 @@
|
||||
{
|
||||
"APL": "annotation_type APL",
|
||||
"APL_spiking_outgoing_weights": "frozen graded overlay zeros these; applied graded effect recorded separately",
|
||||
"DAN": "neurotransmitter dopamine (not inferred PAM/PPL1 name)",
|
||||
"KC": "annotation_class Kenyon_Cell",
|
||||
"MBON": "annotation_class MBON",
|
||||
"PN_olfactory": "annotation_class ALPN or olfactory",
|
||||
"other": "all remaining metadata classes; not an assertion of biological unknown"
|
||||
}
|
||||
+189
@@ -0,0 +1,189 @@
|
||||
{
|
||||
"current": {
|
||||
"P": {
|
||||
"checked": 86,
|
||||
"control": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime"
|
||||
},
|
||||
"P_candidate": {
|
||||
"checked": 10,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate"
|
||||
},
|
||||
"Q": {
|
||||
"checked": 24,
|
||||
"control": "/data/digital-drosophila/experiments/phase4q-credit-v3/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4q-credit-v3"
|
||||
},
|
||||
"Q_model": {
|
||||
"checked": 6,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/credit-v3/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/credit-v3"
|
||||
},
|
||||
"R": {
|
||||
"checked": 205,
|
||||
"control": "/data/digital-drosophila/experiments/phase4r-timing-audit/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4r-timing-audit"
|
||||
},
|
||||
"R_model": {
|
||||
"checked": 5,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/timing-audit-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/timing-audit-v1"
|
||||
},
|
||||
"U_prior_model": {
|
||||
"checked": 5,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/odor-timing-generalization-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/odor-timing-generalization-v1"
|
||||
},
|
||||
"U_prior_root": {
|
||||
"checked": 150,
|
||||
"control": "/data/digital-drosophila/experiments/phase4u-odor-generalization/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4u-odor-generalization"
|
||||
},
|
||||
"V_prior_model": {
|
||||
"checked": 5,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/csus-audit-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/csus-audit-v1"
|
||||
},
|
||||
"V_prior_root": {
|
||||
"checked": 244,
|
||||
"control": "/data/digital-drosophila/experiments/phase4v-csus-semantics/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4v-csus-semantics"
|
||||
},
|
||||
"prior_model": {
|
||||
"checked": 6,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/timing-stability-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/timing-stability-v1"
|
||||
},
|
||||
"prior_root": {
|
||||
"checked": 217,
|
||||
"control": "/data/digital-drosophila/experiments/phase4t-timing-stability/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4t-timing-stability"
|
||||
},
|
||||
"source_model": {
|
||||
"checked": 4,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/timing-credit-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/timing-credit-v1"
|
||||
},
|
||||
"source_root": {
|
||||
"checked": 46,
|
||||
"control": "/data/digital-drosophila/experiments/phase4s-timing-credit/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4s-timing-credit"
|
||||
}
|
||||
},
|
||||
"history": {
|
||||
"Phase1_to_3B": {
|
||||
"all_passed": true,
|
||||
"phase1_phase2_backup_sha256": {
|
||||
"passed": true,
|
||||
"returncode": 0,
|
||||
"stderr": ""
|
||||
},
|
||||
"phase3_sha256": {
|
||||
"passed": true,
|
||||
"returncode": 0,
|
||||
"stderr": ""
|
||||
},
|
||||
"phase3b_166700_sha256": {
|
||||
"passed": true,
|
||||
"returncode": 0,
|
||||
"stderr": ""
|
||||
},
|
||||
"phase3b_audit_sha256": {
|
||||
"passed": true,
|
||||
"returncode": 0,
|
||||
"stderr": ""
|
||||
},
|
||||
"raw_core_sha256": {
|
||||
"passed": true,
|
||||
"returncode": 0,
|
||||
"stderr": ""
|
||||
},
|
||||
"raw_skeleton_md5": {
|
||||
"passed": true,
|
||||
"returncode": 0,
|
||||
"stderr": ""
|
||||
}
|
||||
},
|
||||
"Phase4C_to_4L": {
|
||||
"all_passed": true,
|
||||
"phase4c_to_4i": true,
|
||||
"phase4j_to_4l": {
|
||||
"phase4j_model_root": true,
|
||||
"phase4j_root": true,
|
||||
"phase4k_model_root": true,
|
||||
"phase4k_root": true,
|
||||
"phase4l_model_root": true,
|
||||
"phase4l_root": true
|
||||
}
|
||||
},
|
||||
"Phase4M_4N": {
|
||||
"Phase4M experiment": {
|
||||
"checked": 80,
|
||||
"control": "/data/digital-drosophila/experiments/phase4m-kcmbon-efficacy/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4m-kcmbon-efficacy"
|
||||
},
|
||||
"Phase4M model": {
|
||||
"checked": 7,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/kcmbon-efficacy-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/kcmbon-efficacy-v1"
|
||||
},
|
||||
"Phase4N experiment": {
|
||||
"checked": 396,
|
||||
"control": "/data/digital-drosophila/experiments/phase4n-credit-assignment/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4n-credit-assignment"
|
||||
},
|
||||
"Phase4N model": {
|
||||
"checked": 12,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/credit-assignment-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/credit-assignment-v1"
|
||||
}
|
||||
},
|
||||
"Phase4O": {
|
||||
"checked": 40,
|
||||
"control": "/data/digital-drosophila/experiments/phase4o-runtime-credit/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4o-runtime-credit"
|
||||
},
|
||||
"all_static_checks_passed": true,
|
||||
"frozen_input_hashes_unchanged": true
|
||||
},
|
||||
"pass": true
|
||||
}
|
||||
@@ -0,0 +1,100 @@
|
||||
{
|
||||
"P": {
|
||||
"checked": 86,
|
||||
"control": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime"
|
||||
},
|
||||
"P_candidate": {
|
||||
"checked": 10,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate"
|
||||
},
|
||||
"Q": {
|
||||
"checked": 24,
|
||||
"control": "/data/digital-drosophila/experiments/phase4q-credit-v3/manifests/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4q-credit-v3"
|
||||
},
|
||||
"Q_model": {
|
||||
"checked": 6,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/credit-v3/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/credit-v3"
|
||||
},
|
||||
"R": {
|
||||
"checked": 205,
|
||||
"control": "/data/digital-drosophila/experiments/phase4r-timing-audit/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4r-timing-audit"
|
||||
},
|
||||
"R_model": {
|
||||
"checked": 5,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/timing-audit-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/timing-audit-v1"
|
||||
},
|
||||
"U_prior_model": {
|
||||
"checked": 5,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/odor-timing-generalization-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/odor-timing-generalization-v1"
|
||||
},
|
||||
"U_prior_root": {
|
||||
"checked": 150,
|
||||
"control": "/data/digital-drosophila/experiments/phase4u-odor-generalization/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4u-odor-generalization"
|
||||
},
|
||||
"V_prior_model": {
|
||||
"checked": 5,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/csus-audit-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/csus-audit-v1"
|
||||
},
|
||||
"V_prior_root": {
|
||||
"checked": 244,
|
||||
"control": "/data/digital-drosophila/experiments/phase4v-csus-semantics/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4v-csus-semantics"
|
||||
},
|
||||
"prior_model": {
|
||||
"checked": 6,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/timing-stability-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/timing-stability-v1"
|
||||
},
|
||||
"prior_root": {
|
||||
"checked": 217,
|
||||
"control": "/data/digital-drosophila/experiments/phase4t-timing-stability/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4t-timing-stability"
|
||||
},
|
||||
"source_model": {
|
||||
"checked": 4,
|
||||
"control": "/data/digital-drosophila/models/male-cns-lif/timing-credit-v1/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/models/male-cns-lif/timing-credit-v1"
|
||||
},
|
||||
"source_root": {
|
||||
"checked": 46,
|
||||
"control": "/data/digital-drosophila/experiments/phase4s-timing-credit/checksums.sha256",
|
||||
"failures": [],
|
||||
"passed": true,
|
||||
"root": "/data/digital-drosophila/experiments/phase4s-timing-credit"
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,15 @@
|
||||
{
|
||||
"CPU_replay_exact": true,
|
||||
"candidate": false,
|
||||
"full_event_repeat_exact": true,
|
||||
"integrity_pass": true,
|
||||
"learning": false,
|
||||
"paths": 36,
|
||||
"phase": "4W",
|
||||
"prior_V_exact": true,
|
||||
"reference_pass": true,
|
||||
"rooted_time_supported_paths": 36,
|
||||
"status": "COMPLETE-CONDITIONAL-MECHANISM-AUDIT",
|
||||
"trials": 6,
|
||||
"whole_brain_causal_necessity_proven": false
|
||||
}
|
||||
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,6 @@
|
||||
{
|
||||
"GPU": "NVIDIA GeForce RTX 4090",
|
||||
"instrumentation_overhead_included": true,
|
||||
"peak_VRAM_bytes": 399121408,
|
||||
"wall_seconds_excluding_build": 290.60898720800014
|
||||
}
|
||||
+226
@@ -0,0 +1,226 @@
|
||||
[
|
||||
{
|
||||
"CPU_isolated_exact": [
|
||||
{
|
||||
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||||
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||||
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||||
"g_exact": true,
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
"neuron_idx": 78836,
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||||
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||||
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||||
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||||
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||||
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||||
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||||
"g_exact": true,
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||||
"neuron_idx": 82312,
|
||||
"queue_exact": true
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||||
}
|
||||
],
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||||
"prior_V_exact": {
|
||||
"KC_events": true,
|
||||
"counts": true,
|
||||
"final_g": true,
|
||||
"final_v": true,
|
||||
"finite": true,
|
||||
"trace": true
|
||||
},
|
||||
"repeat_full_events_exact": true,
|
||||
"repeat_watched_state_exact": true,
|
||||
"trial": "0-131101-offset"
|
||||
},
|
||||
{
|
||||
"CPU_isolated_exact": [
|
||||
{
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||||
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||||
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||||
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|
||||
"g_exact": true,
|
||||
"neuron_idx": 59832,
|
||||
"queue_exact": true
|
||||
},
|
||||
{
|
||||
"V_exact": true,
|
||||
"events_exact": true,
|
||||
"final_g_exact": true,
|
||||
"g_exact": true,
|
||||
"neuron_idx": 78836,
|
||||
"queue_exact": true
|
||||
},
|
||||
{
|
||||
"V_exact": true,
|
||||
"events_exact": true,
|
||||
"final_g_exact": true,
|
||||
"g_exact": true,
|
||||
"neuron_idx": 82312,
|
||||
"queue_exact": true
|
||||
}
|
||||
],
|
||||
"prior_V_exact": {
|
||||
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|
||||
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|
||||
"final_g": true,
|
||||
"final_v": true,
|
||||
"finite": true,
|
||||
"trace": true
|
||||
},
|
||||
"trial": "1-131101-offset"
|
||||
},
|
||||
{
|
||||
"CPU_isolated_exact": [
|
||||
{
|
||||
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|
||||
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|
||||
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|
||||
"g_exact": true,
|
||||
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|
||||
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|
||||
},
|
||||
{
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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||||
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||||
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||||
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||||
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|
||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
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|
||||
"finite": true,
|
||||
"trace": true
|
||||
},
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||||
"trial": "2-131101-offset"
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||||
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|
||||
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|
||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
},
|
||||
{
|
||||
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|
||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
"finite": true,
|
||||
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|
||||
},
|
||||
"trial": "3-131101-offset"
|
||||
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|
||||
{
|
||||
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|
||||
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|
||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
{
|
||||
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|
||||
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|
||||
"final_g_exact": true,
|
||||
"g_exact": true,
|
||||
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|
||||
"queue_exact": true
|
||||
},
|
||||
{
|
||||
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|
||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
"final_g": true,
|
||||
"final_v": true,
|
||||
"finite": true,
|
||||
"trace": true
|
||||
},
|
||||
"trial": "4-131101-offset"
|
||||
},
|
||||
{
|
||||
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|
||||
{
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
},
|
||||
{
|
||||
"V_exact": true,
|
||||
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|
||||
"final_g_exact": true,
|
||||
"g_exact": true,
|
||||
"neuron_idx": 78836,
|
||||
"queue_exact": true
|
||||
},
|
||||
{
|
||||
"V_exact": true,
|
||||
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|
||||
"final_g_exact": true,
|
||||
"g_exact": true,
|
||||
"neuron_idx": 82312,
|
||||
"queue_exact": true
|
||||
}
|
||||
],
|
||||
"prior_V_exact": {
|
||||
"KC_events": true,
|
||||
"counts": true,
|
||||
"final_g": true,
|
||||
"final_v": true,
|
||||
"finite": true,
|
||||
"trace": true
|
||||
},
|
||||
"trial": "5-131101-offset"
|
||||
}
|
||||
]
|
||||
+60
@@ -0,0 +1,60 @@
|
||||
{
|
||||
"pass": true,
|
||||
"rows": [
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"pass": true,
|
||||
"trial": "auditory-10hz"
|
||||
},
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"pass": true,
|
||||
"trial": "auditory-100hz"
|
||||
},
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"pass": true,
|
||||
"trial": "olfactory-50hz"
|
||||
},
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"pass": true,
|
||||
"trial": "mechanosensory-50hz"
|
||||
},
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"pass": true,
|
||||
"trial": "gustatory-50hz"
|
||||
}
|
||||
]
|
||||
}
|
||||
Reference in New Issue
Block a user