Archive MaleCNS research sources, provenance, bibliography and immutable data inventory

This commit is contained in:
Digital Drosophila Archive
2026-09-29 03:38:32 +08:00
commit 3981628ff8
682 changed files with 161475 additions and 0 deletions
@@ -0,0 +1,49 @@
# Phase 4R — KC–US timing audit
Status: COMPLETED-DIAGNOSTIC-NO-CANDIDATE. No training, new timing selection, weight update or next phase.
## Fixed-event matched/random ratio
| Seed split | Window (ms) | Random [0,120) | Random [30,110] |
|---|---:|---:|---:|
| calibration | 5 | 0.017351 | 0.131271 |
| calibration | 10 | 0.040701 | 0.230398 |
| calibration | 20 | 0.067120 | 0.167925 |
| calibration | 50 | 0.058699 | 0.070346 |
| calibration | 100 | 0.494515 | 0.457529 |
| calibration | 250 | 0.902178 | 0.763949 |
| heldout | 5 | 0.342145 | 2.648988 |
| heldout | 10 | 0.225614 | 1.337659 |
| heldout | 20 | 0.149717 | 0.392041 |
| heldout | 50 | 0.080961 | 0.099113 |
| heldout | 100 | 0.495901 | 0.463649 |
| heldout | 250 | 0.898125 | 0.765088 |
## Actual target-compartment KC timing
- {"split": "calibration", "label": "CAL_A", "peak_bin_start_ms": 20.0, "peak_spikes_per_5ms": 42.8, "spikes_85_90ms": 0.0, "fraction_events_first30ms": 0.9137931034482758, "median_last_spike_age_at_US_ms_edge_weighted": 69.05000000000001, "p10_last_spike_age_ms": 65.0, "fraction_edges_recent_20ms": 0.000474158368895211}
- {"split": "calibration", "label": "CAL_B", "peak_bin_start_ms": 15.0, "peak_spikes_per_5ms": 36.8, "spikes_85_90ms": 0.4, "fraction_events_first30ms": 0.9011627906976745, "median_last_spike_age_at_US_ms_edge_weighted": 71.3, "p10_last_spike_age_ms": 67.39, "fraction_edges_recent_20ms": 0.000474158368895211}
- {"split": "heldout", "label": "CAL_A", "peak_bin_start_ms": 20.0, "peak_spikes_per_5ms": 46.4, "spikes_85_90ms": 0.4, "fraction_events_first30ms": 0.9108910891089108, "median_last_spike_age_at_US_ms_edge_weighted": 69.0, "p10_last_spike_age_ms": 65.4, "fraction_edges_recent_20ms": 0.000474158368895211}
- {"split": "heldout", "label": "CAL_B", "peak_bin_start_ms": 15.0, "peak_spikes_per_5ms": 37.2, "spikes_85_90ms": 0.8, "fraction_events_first30ms": 0.8902821316614421, "median_last_spike_age_at_US_ms_edge_weighted": 72.60000000000001, "p10_last_spike_age_ms": 67.8, "fraction_edges_recent_20ms": 0.000474158368895211}
## Verification
- Phase 4Q events and credit reproduced: True
- Ten full-runtime repeat runs exact: True
- Five frozen trials, two repeats each: True
- Equal delay on both pathways preserves relative timing: True
## Interpretation and limits
- Phase 4Q failure reproduced only for its declared timing protocol; it is not evidence against all local credit rules.
- Early target-KC activity and late 90ms reinforcement are measured associations. No APL ablation was authorized, so APL causation remains unresolved.
- The exact uniform-time expectations remove random-US sampling noise on the same KC event stream.
- US=0..120ms versus 30..110ms is a protocol difference, not an event-energy mismatch. Both use one forced spike per selected DAN.
- The same 1.8ms delay on KC and DAN leaves relative timing unchanged. Counting only KC arrival is a different gate convention.
- Pre-existing Phase 4Q controls were offline algebraic tests. This audit adds recorded events, disk checkpoint restoration, real full-runtime repeats and frozen reference comparisons.
- No timing/eligibility candidate was selected. Independent heldout seeds replicate diagnosis; heldout odor generalization was not tested.
- Heldout 5ms/10ms credit exceeds the narrower random-N expectation (2.649x/1.338x), but calibration does not replicate this and all ratios remain below the prior 3x gate.
![Timing audit](../figures/timing-audit.png)
Final integrity verification is recorded separately in audit/frozen-integrity.json and the root checksums.sha256.
@@ -0,0 +1,121 @@
{
"Phase1_4O": {
"Phase1_to_3B": {
"all_passed": true,
"phase1_phase2_backup_sha256": {
"passed": true,
"returncode": 0,
"stderr": ""
},
"phase3_sha256": {
"passed": true,
"returncode": 0,
"stderr": ""
},
"phase3b_166700_sha256": {
"passed": true,
"returncode": 0,
"stderr": ""
},
"phase3b_audit_sha256": {
"passed": true,
"returncode": 0,
"stderr": ""
},
"raw_core_sha256": {
"passed": true,
"returncode": 0,
"stderr": ""
},
"raw_skeleton_md5": {
"passed": true,
"returncode": 0,
"stderr": ""
}
},
"Phase4C_to_4L": {
"all_passed": true,
"phase4c_to_4i": true,
"phase4j_to_4l": {
"phase4j_model_root": true,
"phase4j_root": true,
"phase4k_model_root": true,
"phase4k_root": true,
"phase4l_model_root": true,
"phase4l_root": true
}
},
"Phase4M_4N": {
"Phase4M experiment": {
"checked": 80,
"control": "/data/digital-drosophila/experiments/phase4m-kcmbon-efficacy/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4m-kcmbon-efficacy"
},
"Phase4M model": {
"checked": 7,
"control": "/data/digital-drosophila/models/male-cns-lif/kcmbon-efficacy-v1/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/models/male-cns-lif/kcmbon-efficacy-v1"
},
"Phase4N experiment": {
"checked": 396,
"control": "/data/digital-drosophila/experiments/phase4n-credit-assignment/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4n-credit-assignment"
},
"Phase4N model": {
"checked": 12,
"control": "/data/digital-drosophila/models/male-cns-lif/credit-assignment-v1/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/models/male-cns-lif/credit-assignment-v1"
}
},
"Phase4O": {
"checked": 40,
"control": "/data/digital-drosophila/experiments/phase4o-runtime-credit/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4o-runtime-credit"
},
"all_static_checks_passed": true,
"frozen_input_hashes_unchanged": true
},
"Phase4P_4Q": {
"P": {
"checked": 86,
"control": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime"
},
"P_candidate": {
"checked": 10,
"control": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate"
},
"Q": {
"checked": 24,
"control": "/data/digital-drosophila/experiments/phase4q-credit-v3/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4q-credit-v3"
},
"Q_model": {
"checked": 6,
"control": "/data/digital-drosophila/models/male-cns-lif/credit-v3/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/models/male-cns-lif/credit-v3"
}
},
"all_passed": true,
"same_before_after": true,
"source_hashes_unchanged": true
}
@@ -0,0 +1,560 @@
{
"candidate_generated": false,
"five_reference_trials_two_repeats_exact": true,
"fixed_event_ratios": [
{
"matched": 0.018289440870285036,
"random_N_exact": 0.1393261993508786,
"random_Q_exact": 1.0540861498924592,
"ratio_N": 0.1312706508574527,
"ratio_Q": 0.017350992489703974,
"split": "calibration",
"window_ms": 5
},
{
"matched": 0.08421135768294334,
"random_N_exact": 0.3655030649241525,
"random_Q_exact": 2.0690166372675454,
"ratio_N": 0.23039849939539764,
"ratio_Q": 0.040701150568879615,
"split": "calibration",
"window_ms": 10
},
{
"matched": 0.2720220059156418,
"random_N_exact": 1.619898363911081,
"random_Q_exact": 4.052770160483817,
"ratio_N": 0.16792535382212012,
"ratio_Q": 0.0671200179491965,
"split": "calibration",
"window_ms": 20
},
{
"matched": 0.5723733961582184,
"random_N_exact": 8.136530840041116,
"random_Q_exact": 9.750976653377217,
"ratio_N": 0.07034612261794439,
"ratio_Q": 0.05869908384612723,
"split": "calibration",
"window_ms": 50
},
{
"matched": 9.391122939437627,
"random_N_exact": 20.525734224732734,
"random_Q_exact": 18.990561331759203,
"ratio_N": 0.4575292087783968,
"ratio_Q": 0.49451528974723963,
"split": "calibration",
"window_ms": 100
},
{
"matched": 31.068125841021537,
"random_N_exact": 40.66779589611292,
"random_Q_exact": 34.436803252143164,
"ratio_N": 0.7639490942756273,
"ratio_Q": 0.9021779871245169,
"split": "calibration",
"window_ms": 250
},
{
"matched": 0.34724832624197005,
"random_N_exact": 0.13108717918908225,
"random_Q_exact": 1.0149149899793168,
"ratio_N": 2.648987707189072,
"ratio_Q": 0.34214523351265774,
"split": "heldout",
"window_ms": 5
},
{
"matched": 0.4489832133054733,
"random_N_exact": 0.3356486068700906,
"random_Q_exact": 1.9900508151693892,
"ratio_N": 1.3376585039104532,
"ratio_Q": 0.2256139440676829,
"split": "heldout",
"window_ms": 10
},
{
"matched": 0.5835820764303208,
"random_N_exact": 1.4885730991167947,
"random_Q_exact": 3.897906442171584,
"ratio_N": 0.3920412620492562,
"ratio_Q": 0.1497167992839762,
"split": "heldout",
"window_ms": 20
},
{
"matched": 0.7595419704914093,
"random_N_exact": 7.6633822981612765,
"random_Q_exact": 9.381602759805196,
"ratio_N": 0.09911315147016102,
"ratio_Q": 0.08096078995644672,
"split": "heldout",
"window_ms": 50
},
{
"matched": 9.065953924506903,
"random_N_exact": 19.553495740576647,
"random_Q_exact": 18.2817877383378,
"ratio_N": 0.4636487533885612,
"ratio_Q": 0.49590084155146136,
"split": "heldout",
"window_ms": 100
},
{
"matched": 29.834765711426734,
"random_N_exact": 38.99518462149612,
"random_Q_exact": 33.218945012715956,
"ratio_N": 0.7650884590242535,
"ratio_Q": 0.8981250217310097,
"split": "heldout",
"window_ms": 250
}
],
"full_runtime_ten_repeats_exact": true,
"heldout_all_windows_ratio_below_one_N": false,
"heldout_all_windows_ratio_below_one_Q": true,
"important_qualification": "Heldout 5ms/10ms credit exceeds the narrower random-N expectation (2.649x/1.338x), but calibration does not replicate this and all ratios remain below the prior 3x gate.",
"interpretation_limits": [
"Phase 4Q failure reproduced only for its declared timing protocol; it is not evidence against all local credit rules.",
"Early target-KC activity and late 90ms reinforcement are measured associations. No APL ablation was authorized, so APL causation remains unresolved.",
"The exact uniform-time expectations remove random-US sampling noise on the same KC event stream.",
"US=0..120ms versus 30..110ms is a protocol difference, not an event-energy mismatch. Both use one forced spike per selected DAN.",
"The same 1.8ms delay on KC and DAN leaves relative timing unchanged. Counting only KC arrival is a different gate convention.",
"Pre-existing Phase 4Q controls were offline algebraic tests. This audit adds recorded events, disk checkpoint restoration, real full-runtime repeats and frozen reference comparisons.",
"No timing/eligibility candidate was selected. Independent heldout seeds replicate diagnosis; heldout odor generalization was not tested."
],
"mechanism_labels": [
"KC-US-TIMING-MISMATCH-SUPPORTED",
"RANDOM-TIMING-DISTRIBUTION-EFFECT-CONFIRMED",
"CURRENT-GATE-CREDIT-UNCHANGED-BY-DAN-FEEDBACK",
"FROZEN-RUNTIME-REGRESSION-PASS"
],
"next_phase_started": false,
"next_step": "Pre-register stimulus and reinforcement timing using independent calibration data; keep brain and learning magnitude frozen. Do not select an optimum from heldout results.",
"offline_controls_all_pass": true,
"paired_network_effects": [
{
"changed_event_streams": 1,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 5
},
{
"changed_event_streams": 1,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 10
},
{
"changed_event_streams": 1,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 20
},
{
"changed_event_streams": 1,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 50
},
{
"changed_event_streams": 1,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 100
},
{
"changed_event_streams": 1,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 250
},
{
"changed_event_streams": 4,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.1,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 5
},
{
"changed_event_streams": 4,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.1,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 10
},
{
"changed_event_streams": 4,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.1,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 20
},
{
"changed_event_streams": 4,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.1,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 50
},
{
"changed_event_streams": 4,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.1,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 100
},
{
"changed_event_streams": 4,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.1,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 250
},
{
"changed_event_streams": 6,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.4,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 5
},
{
"changed_event_streams": 6,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.4,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 10
},
{
"changed_event_streams": 6,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.4,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 20
},
{
"changed_event_streams": 6,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.4,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 50
},
{
"changed_event_streams": 6,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.4,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 100
},
{
"changed_event_streams": 6,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.4,
"mean_absolute_feedback_credit": 0.0,
"split": "calibration",
"trials": 10,
"window_ms": 250
},
{
"changed_event_streams": 3,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 5
},
{
"changed_event_streams": 3,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 10
},
{
"changed_event_streams": 3,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 20
},
{
"changed_event_streams": 3,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 50
},
{
"changed_event_streams": 3,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 100
},
{
"changed_event_streams": 3,
"condition": "matched_90ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 250
},
{
"changed_event_streams": 6,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 5
},
{
"changed_event_streams": 6,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 10
},
{
"changed_event_streams": 6,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 20
},
{
"changed_event_streams": 6,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 50
},
{
"changed_event_streams": 6,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 100
},
{
"changed_event_streams": 6,
"condition": "random_N_30_110ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.0,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 250
},
{
"changed_event_streams": 9,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.5,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 5
},
{
"changed_event_streams": 9,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.5,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 10
},
{
"changed_event_streams": 9,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.5,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 20
},
{
"changed_event_streams": 9,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.5,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 50
},
{
"changed_event_streams": 9,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.5,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 100
},
{
"changed_event_streams": 9,
"condition": "random_Q_0_120ms",
"max_absolute_feedback_credit": 0.0,
"mean_KC_count_L1": 0.5,
"mean_absolute_feedback_credit": 0.0,
"split": "heldout",
"trials": 10,
"window_ms": 250
}
],
"performance": {
"CPU_percent_one_core": 99.97323600267339,
"GPU_name": "NVIDIA GeForce RTX 4090",
"GPU_utilization": "not sampled; not inferred from timing",
"brain_runs_main": 80,
"extra_full_runtime_repeats": 9,
"frozen_reference_runs": 10,
"main_brain_wall_seconds": 79.16629350299922,
"peak_RAM_bytes": 2718560256,
"peak_VRAM_bytes": 398835200,
"wall_seconds_audit_and_regression": 161.9598129200001
},
"phase4q_reproduced_exact": true,
"status": "COMPLETED-DIAGNOSTIC-NO-CANDIDATE",
"symmetric_delay_exact": true,
"timing": [
{
"fraction_edges_recent_20ms": 0.000474158368895211,
"fraction_events_first30ms": 0.9137931034482758,
"label": "CAL_A",
"median_last_spike_age_at_US_ms_edge_weighted": 69.05000000000001,
"p10_last_spike_age_ms": 65.0,
"peak_bin_start_ms": 20.0,
"peak_spikes_per_5ms": 42.8,
"spikes_85_90ms": 0.0,
"split": "calibration"
},
{
"fraction_edges_recent_20ms": 0.000474158368895211,
"fraction_events_first30ms": 0.9011627906976745,
"label": "CAL_B",
"median_last_spike_age_at_US_ms_edge_weighted": 71.3,
"p10_last_spike_age_ms": 67.39,
"peak_bin_start_ms": 15.0,
"peak_spikes_per_5ms": 36.8,
"spikes_85_90ms": 0.4,
"split": "calibration"
},
{
"fraction_edges_recent_20ms": 0.000474158368895211,
"fraction_events_first30ms": 0.9108910891089108,
"label": "CAL_A",
"median_last_spike_age_at_US_ms_edge_weighted": 69.0,
"p10_last_spike_age_ms": 65.4,
"peak_bin_start_ms": 20.0,
"peak_spikes_per_5ms": 46.4,
"spikes_85_90ms": 0.4,
"split": "heldout"
},
{
"fraction_edges_recent_20ms": 0.000474158368895211,
"fraction_events_first30ms": 0.8902821316614421,
"label": "CAL_B",
"median_last_spike_age_at_US_ms_edge_weighted": 72.60000000000001,
"p10_last_spike_age_ms": 67.8,
"peak_bin_start_ms": 15.0,
"peak_spikes_per_5ms": 37.2,
"spikes_85_90ms": 0.8,
"split": "heldout"
}
],
"training_run": false
}
@@ -0,0 +1,11 @@
{
"failure": "main audit completed simulations and numerical regression, then matplotlib import failed",
"recovery": "rendered saved events in an isolated temporary plotting environment; no simulations repeated",
"runtime_environment_modified": false,
"versions": {
"matplotlib": "3.10.7",
"numpy": "2.2.6",
"pandas": "2.3.3",
"pyarrow": "25.0.1"
}
}
@@ -0,0 +1,30 @@
{
"P": {
"checked": 86,
"control": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4p-deterministic-runtime"
},
"P_candidate": {
"checked": 10,
"control": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/models/male-cns-lif/deterministic-runtime-v2/candidate"
},
"Q": {
"checked": 24,
"control": "/data/digital-drosophila/experiments/phase4q-credit-v3/manifests/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/experiments/phase4q-credit-v3"
},
"Q_model": {
"checked": 6,
"control": "/data/digital-drosophila/models/male-cns-lif/credit-v3/checksums.sha256",
"failures": [],
"passed": true,
"root": "/data/digital-drosophila/models/male-cns-lif/credit-v3"
}
}
@@ -0,0 +1,555 @@
{
"activity_by_condition": [
{
"KC_active": 165.6,
"KC_events": 190.7,
"compartment_events_85_to_90ms": 0.2,
"compartment_fraction_first_30ms": 0.9071493702560257,
"condition": "matched_90ms",
"split": "calibration"
},
{
"KC_active": 165.6,
"KC_events": 190.7,
"compartment_events_85_to_90ms": 0.2,
"compartment_fraction_first_30ms": 0.9071493702560257,
"condition": "no_external_US",
"split": "calibration"
},
{
"KC_active": 165.6,
"KC_events": 190.6,
"compartment_events_85_to_90ms": 0.2,
"compartment_fraction_first_30ms": 0.9084208882528959,
"condition": "random_N_30_110ms",
"split": "calibration"
},
{
"KC_active": 165.7,
"KC_events": 190.9,
"compartment_events_85_to_90ms": 0.3,
"compartment_fraction_first_30ms": 0.9047910984087368,
"condition": "random_Q_0_120ms",
"split": "calibration"
},
{
"KC_active": 164.6,
"KC_events": 189.7,
"compartment_events_85_to_90ms": 0.6,
"compartment_fraction_first_30ms": 0.9003733150788612,
"condition": "matched_90ms",
"split": "heldout"
},
{
"KC_active": 164.6,
"KC_events": 189.7,
"compartment_events_85_to_90ms": 0.6,
"compartment_fraction_first_30ms": 0.9003733150788612,
"condition": "no_external_US",
"split": "heldout"
},
{
"KC_active": 164.6,
"KC_events": 189.7,
"compartment_events_85_to_90ms": 0.5,
"compartment_fraction_first_30ms": 0.9003733150788612,
"condition": "random_N_30_110ms",
"split": "heldout"
},
{
"KC_active": 164.8,
"KC_events": 189.8,
"compartment_events_85_to_90ms": 0.5,
"compartment_fraction_first_30ms": 0.9003833005545332,
"condition": "random_Q_0_120ms",
"split": "heldout"
}
],
"formal_AB_evaluated": false,
"learning_run": false,
"limitations": [
"Same two calibration odors with independent heldout seeds; not heldout odors or generalization proof.",
"No APL ablation; early transient cannot be uniquely attributed to APL.",
"Emission-time vs arrival-time semantics audited without changing frozen teaching semantics.",
"No training or functional associative-memory gate in this audit.",
"Frozen-group labels belong to formal A/B; calibration credit on these groups is not calibration odor specificity."
],
"network_effects": [
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.2,
"condition": "matched_90ms",
"fixed_KC_credit": 0.018289440870285036,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.018289440870285036,
"split": "calibration",
"window_ms": 5
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.2,
"condition": "matched_90ms",
"fixed_KC_credit": 0.08421135768294334,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.08421135768294334,
"split": "calibration",
"window_ms": 10
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.2,
"condition": "matched_90ms",
"fixed_KC_credit": 0.2720220059156418,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.2720220059156418,
"split": "calibration",
"window_ms": 20
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.2,
"condition": "matched_90ms",
"fixed_KC_credit": 0.5723733961582184,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.5723733961582184,
"split": "calibration",
"window_ms": 50
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.2,
"condition": "matched_90ms",
"fixed_KC_credit": 9.391122939437627,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 9.391122939437627,
"split": "calibration",
"window_ms": 100
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.2,
"condition": "matched_90ms",
"fixed_KC_credit": 31.068125841021537,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 31.068125841021537,
"split": "calibration",
"window_ms": 250
},
{
"KC_count_L1_vs_noUS": 0.1,
"MBON_count_L1_vs_noUS": 1.5,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 0.1588439628481865,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.1588439628481865,
"split": "calibration",
"window_ms": 5
},
{
"KC_count_L1_vs_noUS": 0.1,
"MBON_count_L1_vs_noUS": 1.5,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 0.350557991117239,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.350557991117239,
"split": "calibration",
"window_ms": 10
},
{
"KC_count_L1_vs_noUS": 0.1,
"MBON_count_L1_vs_noUS": 1.5,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 1.3722135305404664,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 1.3722135305404664,
"split": "calibration",
"window_ms": 20
},
{
"KC_count_L1_vs_noUS": 0.1,
"MBON_count_L1_vs_noUS": 1.5,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 7.25383392162621,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 7.25383392162621,
"split": "calibration",
"window_ms": 50
},
{
"KC_count_L1_vs_noUS": 0.1,
"MBON_count_L1_vs_noUS": 1.5,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 19.592722258716822,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 19.592722258716822,
"split": "calibration",
"window_ms": 100
},
{
"KC_count_L1_vs_noUS": 0.1,
"MBON_count_L1_vs_noUS": 1.5,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 39.96453789770603,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 39.96453789770603,
"split": "calibration",
"window_ms": 250
},
{
"KC_count_L1_vs_noUS": 0.4,
"MBON_count_L1_vs_noUS": 4.4,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 2.3523003734648227,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 2.3523003734648227,
"split": "calibration",
"window_ms": 5
},
{
"KC_count_L1_vs_noUS": 0.4,
"MBON_count_L1_vs_noUS": 4.4,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 3.482248479500413,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 3.482248479500413,
"split": "calibration",
"window_ms": 10
},
{
"KC_count_L1_vs_noUS": 0.4,
"MBON_count_L1_vs_noUS": 4.4,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 5.75694828890264,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 5.75694828890264,
"split": "calibration",
"window_ms": 20
},
{
"KC_count_L1_vs_noUS": 0.4,
"MBON_count_L1_vs_noUS": 4.4,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 11.873166762292385,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 11.873166762292385,
"split": "calibration",
"window_ms": 50
},
{
"KC_count_L1_vs_noUS": 0.4,
"MBON_count_L1_vs_noUS": 4.4,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 21.49005110487342,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 21.49005110487342,
"split": "calibration",
"window_ms": 100
},
{
"KC_count_L1_vs_noUS": 0.4,
"MBON_count_L1_vs_noUS": 4.4,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 37.288023948669434,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 37.288023948669434,
"split": "calibration",
"window_ms": 250
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.1,
"condition": "matched_90ms",
"fixed_KC_credit": 0.34724832624197005,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.34724832624197005,
"split": "heldout",
"window_ms": 5
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.1,
"condition": "matched_90ms",
"fixed_KC_credit": 0.4489832133054733,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.4489832133054733,
"split": "heldout",
"window_ms": 10
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.1,
"condition": "matched_90ms",
"fixed_KC_credit": 0.5835820764303208,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.5835820764303208,
"split": "heldout",
"window_ms": 20
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.1,
"condition": "matched_90ms",
"fixed_KC_credit": 0.7595419704914093,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.7595419704914093,
"split": "heldout",
"window_ms": 50
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.1,
"condition": "matched_90ms",
"fixed_KC_credit": 9.065953924506903,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 9.065953924506903,
"split": "heldout",
"window_ms": 100
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 0.1,
"condition": "matched_90ms",
"fixed_KC_credit": 29.834765711426734,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 29.834765711426734,
"split": "heldout",
"window_ms": 250
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 1.4,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 0.1451025404036045,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.1451025404036045,
"split": "heldout",
"window_ms": 5
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 1.4,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 0.2871968936175108,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.2871968936175108,
"split": "heldout",
"window_ms": 10
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 1.4,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 1.1376711919903755,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 1.1376711919903755,
"split": "heldout",
"window_ms": 20
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 1.4,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 8.890908436477185,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 8.890908436477185,
"split": "heldout",
"window_ms": 50
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 1.4,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 22.023498380184172,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 22.023498380184172,
"split": "heldout",
"window_ms": 100
},
{
"KC_count_L1_vs_noUS": 0.0,
"MBON_count_L1_vs_noUS": 1.4,
"condition": "random_N_30_110ms",
"fixed_KC_credit": 41.383073058724406,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 41.383073058724406,
"split": "heldout",
"window_ms": 250
},
{
"KC_count_L1_vs_noUS": 0.5,
"MBON_count_L1_vs_noUS": 5.1,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 0.17702990546822547,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 0.17702990546822547,
"split": "heldout",
"window_ms": 5
},
{
"KC_count_L1_vs_noUS": 0.5,
"MBON_count_L1_vs_noUS": 5.1,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 1.1277346912771464,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 1.1277346912771464,
"split": "heldout",
"window_ms": 10
},
{
"KC_count_L1_vs_noUS": 0.5,
"MBON_count_L1_vs_noUS": 5.1,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 4.531611635535955,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 4.531611635535955,
"split": "heldout",
"window_ms": 20
},
{
"KC_count_L1_vs_noUS": 0.5,
"MBON_count_L1_vs_noUS": 5.1,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 13.846355841681362,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 13.846355841681362,
"split": "heldout",
"window_ms": 50
},
{
"KC_count_L1_vs_noUS": 0.5,
"MBON_count_L1_vs_noUS": 5.1,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 23.691914348304273,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 23.691914348304273,
"split": "heldout",
"window_ms": 100
},
{
"KC_count_L1_vs_noUS": 0.5,
"MBON_count_L1_vs_noUS": 5.1,
"condition": "random_Q_0_120ms",
"fixed_KC_credit": 35.985496351122855,
"network_feedback_credit_difference": 0.0,
"rerun_KC_credit": 35.985496351122855,
"split": "heldout",
"window_ms": 250
}
],
"new_eligibility_rule_selected": null,
"new_timing_selected": null,
"next_phase_started": false,
"phase": "4R",
"same_event_ratios": [
{
"matched": 0.018289440870285036,
"random_N_exact": 0.1393261993508786,
"random_Q_exact": 1.0540861498924592,
"ratio_N": 0.1312706508574527,
"ratio_Q": 0.017350992489703974,
"split": "calibration",
"window_ms": 5
},
{
"matched": 0.08421135768294334,
"random_N_exact": 0.3655030649241525,
"random_Q_exact": 2.0690166372675454,
"ratio_N": 0.23039849939539764,
"ratio_Q": 0.040701150568879615,
"split": "calibration",
"window_ms": 10
},
{
"matched": 0.2720220059156418,
"random_N_exact": 1.619898363911081,
"random_Q_exact": 4.052770160483817,
"ratio_N": 0.16792535382212012,
"ratio_Q": 0.0671200179491965,
"split": "calibration",
"window_ms": 20
},
{
"matched": 0.5723733961582184,
"random_N_exact": 8.136530840041116,
"random_Q_exact": 9.750976653377217,
"ratio_N": 0.07034612261794439,
"ratio_Q": 0.05869908384612723,
"split": "calibration",
"window_ms": 50
},
{
"matched": 9.391122939437627,
"random_N_exact": 20.525734224732734,
"random_Q_exact": 18.990561331759203,
"ratio_N": 0.4575292087783968,
"ratio_Q": 0.49451528974723963,
"split": "calibration",
"window_ms": 100
},
{
"matched": 31.068125841021537,
"random_N_exact": 40.66779589611292,
"random_Q_exact": 34.436803252143164,
"ratio_N": 0.7639490942756273,
"ratio_Q": 0.9021779871245169,
"split": "calibration",
"window_ms": 250
},
{
"matched": 0.34724832624197005,
"random_N_exact": 0.13108717918908225,
"random_Q_exact": 1.0149149899793168,
"ratio_N": 2.648987707189072,
"ratio_Q": 0.34214523351265774,
"split": "heldout",
"window_ms": 5
},
{
"matched": 0.4489832133054733,
"random_N_exact": 0.3356486068700906,
"random_Q_exact": 1.9900508151693892,
"ratio_N": 1.3376585039104532,
"ratio_Q": 0.2256139440676829,
"split": "heldout",
"window_ms": 10
},
{
"matched": 0.5835820764303208,
"random_N_exact": 1.4885730991167947,
"random_Q_exact": 3.897906442171584,
"ratio_N": 0.3920412620492562,
"ratio_Q": 0.1497167992839762,
"split": "heldout",
"window_ms": 20
},
{
"matched": 0.7595419704914093,
"random_N_exact": 7.6633822981612765,
"random_Q_exact": 9.381602759805196,
"ratio_N": 0.09911315147016102,
"ratio_Q": 0.08096078995644672,
"split": "heldout",
"window_ms": 50
},
{
"matched": 9.065953924506903,
"random_N_exact": 19.553495740576647,
"random_Q_exact": 18.2817877383378,
"ratio_N": 0.4636487533885612,
"ratio_Q": 0.49590084155146136,
"split": "heldout",
"window_ms": 100
},
{
"matched": 29.834765711426734,
"random_N_exact": 38.99518462149612,
"random_Q_exact": 33.218945012715956,
"ratio_N": 0.7650884590242535,
"ratio_Q": 0.8981250217310097,
"split": "heldout",
"window_ms": 250
}
],
"status": "COMPLETED-DIAGNOSTIC-NO-CANDIDATE",
"symmetric_delay_exact": true
}
@@ -0,0 +1,16 @@
{
"Q_KC_timing": "KC soma/emission event time is called terminal time; does not add 18-step anatomical delay",
"Q_checkpoint": "reconstructs trace from in-memory last-spike array, no disk serialize/restore",
"Q_claim_limit": "calibration failure does not prove universal credit-rule failure or associative-memory failure",
"Q_comparison": "matched and random timing were run separately, so KC streams may differ through DAN/network feedback",
"Q_control_scope": "D0/unrelated/far-before/far-after are algebraic eligibility tests, not physiological control simulations",
"Q_future_far_case": "for window 250 ms, synthetic far-before KC step is negative; this is not an actual runtime event",
"Q_independence": "calibration split selected independently of formal odors; frozen-stimuli file was written after simulations",
"Q_ten_repeats": "same NumPy function called ten times on a synthetic event, not full-brain runtime repeats",
"Q_timing_matrix": "synchronous hypothetical activity on all in-compartment terminals, not measured odor-driven edge-group credit",
"equal_delay_note": "shifting BOTH KC and US by 18 steps preserves relative timing; shifting only KC changes the teaching contract",
"matched_US": "one forced spike per selected DAN at 90 ms; external teaching gate sampled at same emission timestep",
"odor_forcing": "constant PN rate vectors over all 120 ms, Bernoulli events per timestep; no brief CS pulse in this runtime",
"random_N": "continuous uniform [30,110] ms then rounded to a timestep",
"random_Q": "one discrete uniform step over [0,120) ms; unchanged selected DANs/amplitude"
}
File diff suppressed because it is too large Load Diff
@@ -0,0 +1,12 @@
{
"CPU_percent_one_core": 99.97323600267339,
"GPU_name": "NVIDIA GeForce RTX 4090",
"GPU_utilization": "not sampled; not inferred from timing",
"brain_runs_main": 80,
"extra_full_runtime_repeats": 9,
"frozen_reference_runs": 10,
"main_brain_wall_seconds": 79.16629350299922,
"peak_RAM_bytes": 2718560256,
"peak_VRAM_bytes": 398835200,
"wall_seconds_audit_and_regression": 161.9598129200001
}
@@ -0,0 +1,136 @@
{
"all_exact": true,
"reference": "Phase4P phase4c-v2 frozen reference",
"rows": [
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 1,
"trial": "auditory-10hz",
"wall_seconds": 2.6315946439999607
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 2,
"trial": "auditory-10hz",
"wall_seconds": 2.622262886000044
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 1,
"trial": "auditory-100hz",
"wall_seconds": 4.984712846000093
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 2,
"trial": "auditory-100hz",
"wall_seconds": 4.964249916999961
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 1,
"trial": "olfactory-50hz",
"wall_seconds": 5.0117934940001305
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 2,
"trial": "olfactory-50hz",
"wall_seconds": 5.016105871000036
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 1,
"trial": "mechanosensory-50hz",
"wall_seconds": 4.9952714660000765
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 2,
"trial": "mechanosensory-50hz",
"wall_seconds": 5.016184163999924
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 1,
"trial": "gustatory-50hz",
"wall_seconds": 5.003194493999899
},
{
"all_exact": true,
"exact": {
"counts": true,
"g": true,
"neuron_idx": true,
"step": true,
"v": true
},
"repeat": 2,
"trial": "gustatory-50hz",
"wall_seconds": 5.003029487000049
}
]
}
@@ -0,0 +1,115 @@
{
"all_exact": true,
"rows": [
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 2,
"wall_seconds": 0.9748636780000197
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 3,
"wall_seconds": 0.9764683900000364
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 4,
"wall_seconds": 0.9796550260000458
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 5,
"wall_seconds": 0.9771380360000421
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 6,
"wall_seconds": 0.9765706199998476
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 7,
"wall_seconds": 0.9795323570001528
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 8,
"wall_seconds": 0.9762093189999632
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 9,
"wall_seconds": 0.9752645460000622
},
{
"all_exact": true,
"exact": {
"counts": true,
"final_g": true,
"final_v": true,
"kc_event_node": true,
"kc_event_step": true
},
"repeat": 10,
"wall_seconds": 0.9700075729999753
}
],
"runs": 10,
"scope": "one calibration odor/seed, 120ms, unchanged APL and runtime-v2"
}
@@ -0,0 +1,59 @@
{
"rows": [
{
"D0_zero": true,
"disk_checkpoint_restore_exact": true,
"far_after_zero": true,
"far_before_zero": true,
"future_append_invariant": true,
"unrelated_compartment_zero_on_scored_edges": true,
"window_ms": 5
},
{
"D0_zero": true,
"disk_checkpoint_restore_exact": true,
"far_after_zero": true,
"far_before_zero": true,
"future_append_invariant": true,
"unrelated_compartment_zero_on_scored_edges": true,
"window_ms": 10
},
{
"D0_zero": true,
"disk_checkpoint_restore_exact": true,
"far_after_zero": true,
"far_before_zero": true,
"future_append_invariant": true,
"unrelated_compartment_zero_on_scored_edges": true,
"window_ms": 20
},
{
"D0_zero": true,
"disk_checkpoint_restore_exact": true,
"far_after_zero": true,
"far_before_zero": true,
"future_append_invariant": true,
"unrelated_compartment_zero_on_scored_edges": true,
"window_ms": 50
},
{
"D0_zero": true,
"disk_checkpoint_restore_exact": true,
"far_after_zero": true,
"far_before_zero": true,
"future_append_invariant": true,
"unrelated_compartment_zero_on_scored_edges": true,
"window_ms": 100
},
{
"D0_zero": true,
"disk_checkpoint_restore_exact": true,
"far_after_zero": true,
"far_before_zero": true,
"future_append_invariant": true,
"unrelated_compartment_zero_on_scored_edges": true,
"window_ms": 250
}
],
"scope": "actual events, offline eligibility only; not biological controls"
}