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Archive MaleCNS research sources, provenance, bibliography and immutable data inventory

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This commit is contained in:
Digital Drosophila Archive
2026-09-29 03:38:32 +08:00
commit 3981628ff8
682 changed files with 161475 additions and 0 deletions
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registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/api-tests.json
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{
"all_passed": true,
"checkpoint_restore_spikes_exact": true,
"checkpoint_restore_voltage_exact": true,
"continuous_step_does_not_reset_clock": true,
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"per_class_aggregation_labels": 1,
"per_neuron_readout_shape": 1316,
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"readout_modes_passed": true,
"reset_same_seed_continuous_chunk_spikes_exact": true,
"single_vs_chunk_voltage_max_abs_error": 0.0,
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registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/external-drive-semantics.json
+9
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{
"connectome_transmission": false,
"phase4d_amplitude_mv": 8.0,
"phase4d_external_drive_application": "g[target] += amplitude_mv per selected external Poisson event, after g decay/connectome arrival and before membrane integration",
"ratio_phase4d_drive_to_one_anatomical_synapse": 29.09090909090909,
"raw_csr_weight_modified": false,
"units": "mV-equivalent conductance state increment",
"w_syn_mv_per_anatomical_synapse": 0.275
}
registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/immutable-inputs-before.json
+35
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{
"all_passed": true,
"controls": [
{
"checked": 4,
"checksum_file": "/data/digital-drosophila/models/male-cns-lif/reference-v1/checksums.sha256",
"failures": [],
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{
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"checksum_file": "/data/digital-drosophila/models/male-cns-lif/runtime-v1/checksums.sha256",
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"checksum_file": "/data/digital-drosophila/models/male-cns-lif/io-v1/checksums.sha256",
"failures": [],
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{
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"checksum_file": "/data/digital-drosophila/experiments/phase4c-runtime/manifests/checksums.sha256",
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{
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"checksum_file": "/data/digital-drosophila/experiments/phase4d-io/manifests/checksums.sha256",
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registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/phase4d-continuous-contract.json
+6
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{
"checkpoint_replay_events_exact": true,
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registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/regression-summary.json
+136
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{
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"activity_stream": {
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"event_only": true,
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"schema": "/data/digital-drosophila/experiments/phase4e-visual-calibration/activity-stream/activity-packet.schema.json",
"version": "1.0.0"
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"api": {
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"checkpoint_restore_voltage_exact": true,
"continuous_step_does_not_reset_clock": true,
"fixed_temporal_bins_tested": {
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"phase4c_five_trials_passed": true,
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"phase4d_continuous_checkpoint_passed": true,
"trials": {
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"passed": true,
"spike_counts_exact": true,
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"auditory-10hz": {
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"gustatory-50hz": {
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"olfactory-50hz": {
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"passed": true,
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registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/summary.json
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registry/catalog-20260929/evidence/phase4e-visual-calibration/audit/visual-gateway-candidate.json
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{
"adapter_v2_eligible": false,
"adapter_v2_gate_note": "gateway selection uses anatomy/path/propagation; formal adapter eligibility additionally requires deterministic separability",
"condition": {
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"active_fraction": 0.008014397120575886,
"active_neurons": 1336,
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"descending_active": 142,
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"external_drive_events": 2334,
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"multi_hop_output_propagation": true,
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"numerically_finite": true,
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"layer": "engineering-visual-projection",
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"name": "visual_gateway_candidate",
"rule": "gateway iff multi-hop propagation reaches descending or motor output and is non-runaway; rank by lowest amplitude multiple, then lowest min output hops, then hierarchy order. Formal adapter-v2 eligibility additionally requires deterministic nonzero output separability and matched-input-count validation",
"selected": true
}