Archive MaleCNS research sources, provenance, bibliography and immutable data inventory
This commit is contained in:
Digital Drosophila Archive
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@@ -0,0 +1,91 @@
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@@ -0,0 +1,102 @@
|
||||
phase: 4D
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||||
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||||
runtime: MaleCNS-LIF-runtime-v1
|
||||
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||||
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|
||||
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||||
|
||||
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||||
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|
||||
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|
||||
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|
||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
external_drive_application: add to g after decay and delayed-connectome arrival, before membrane integration
|
||||
|
||||
visual_adapter:
|
||||
version: 1.0.0
|
||||
modes:
|
||||
reference-photoreceptor:
|
||||
hierarchy_population: visual_sensory
|
||||
input_mode: spike_injection
|
||||
biological_fidelity: reference_comparison_only
|
||||
engineering-first-order:
|
||||
hierarchy_population: first_order
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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||||
|
||||
readout:
|
||||
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|
||||
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|
||||
|
||||
window_experiment:
|
||||
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|
||||
sources: [engineering-first-order, engineering-second-order, auditory, olfactory]
|
||||
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|
||||
|
||||
continuous_control:
|
||||
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|
||||
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|
||||
sequence: [sparse-A, sparse-B, dense, zero, sparse-A]
|
||||
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|
||||
|
||||
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|
||||
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||||
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||||
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|
||||
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|
||||
|
||||
regression:
|
||||
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|
||||
reference_trials:
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
- {name: gustatory-50hz, population: gustatory, rate_hz: 50, seed: 42003, duration_ms: 1000.0}
|
||||
|
||||
prohibitions:
|
||||
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|
||||
rom_access: false
|
||||
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|
||||
training: false
|
||||
web_server: false
|
||||
connectome_or_sign_changes: false
|
||||
@@ -0,0 +1,54 @@
|
||||
{
|
||||
"10": {
|
||||
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|
||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,182 @@
|
||||
{
|
||||
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|
||||
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|
||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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|
||||
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|
||||
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|
||||
@@ -0,0 +1,263 @@
|
||||
{
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||||
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||||
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|
||||
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||||
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"active_population_overlap_jaccard": 1.0,
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"correlation": 1.0,
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"cosine_distance": 0.0,
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"euclidean_distance": 0.0
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},
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"dense__sparse-B": {
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"active_population_overlap_jaccard": 1.0,
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"correlation": 1.0,
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"cosine_distance": 0.0,
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"euclidean_distance": 0.0
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},
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"moving__sparse-A": {
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"active_population_overlap_jaccard": 1.0,
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"correlation": 1.0,
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"cosine_distance": 0.0,
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"euclidean_distance": 0.0
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},
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"moving__sparse-B": {
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"active_population_overlap_jaccard": 1.0,
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"correlation": 1.0,
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"cosine_distance": 0.0,
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"euclidean_distance": 0.0
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},
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"sparse-A__sparse-B": {
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"active_population_overlap_jaccard": 1.0,
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"correlation": 1.0,
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"cosine_distance": 0.0,
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"euclidean_distance": 0.0
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}
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},
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"patterns": [
|
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"dense",
|
||||
"moving",
|
||||
"sparse-A",
|
||||
"sparse-B"
|
||||
],
|
||||
"pca_usage": "offline visualization analysis only; not an action decoder",
|
||||
"trial_statistics": [
|
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{
|
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"active_channels": 1185,
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"descending_active": 0,
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"descending_rate_hz": 0.0,
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"descending_spikes": 0,
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"feature_norm": 0.0,
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"motor_active": 0,
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"motor_rate_hz": 0.0,
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"motor_spikes": 0,
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"pattern": "sparse-A",
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"seed": 44301
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},
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{
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"descending_spikes": 0,
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"feature_norm": 0.0,
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"motor_active": 0,
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"motor_rate_hz": 0.0,
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"motor_spikes": 0,
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"pattern": "sparse-A",
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"seed": 44302
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||||
},
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{
|
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"active_channels": 1185,
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"descending_active": 0,
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"descending_rate_hz": 0.0,
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"descending_spikes": 0,
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"feature_norm": 0.0,
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"motor_active": 0,
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"motor_rate_hz": 0.0,
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"motor_spikes": 0,
|
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"pattern": "sparse-A",
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"seed": 44303
|
||||
},
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{
|
||||
"active_channels": 1185,
|
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"descending_active": 0,
|
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"descending_rate_hz": 0.0,
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"descending_spikes": 0,
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"feature_norm": 0.0,
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"motor_active": 0,
|
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"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
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"pattern": "sparse-B",
|
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"seed": 44301
|
||||
},
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{
|
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"active_channels": 1185,
|
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"descending_active": 0,
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"descending_rate_hz": 0.0,
|
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"descending_spikes": 0,
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"feature_norm": 0.0,
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"motor_active": 0,
|
||||
"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
||||
"pattern": "sparse-B",
|
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"seed": 44302
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||||
},
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{
|
||||
"active_channels": 1185,
|
||||
"descending_active": 0,
|
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"descending_rate_hz": 0.0,
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"descending_spikes": 0,
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"feature_norm": 0.0,
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"motor_active": 0,
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||||
"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
||||
"pattern": "sparse-B",
|
||||
"seed": 44303
|
||||
},
|
||||
{
|
||||
"active_channels": 5927,
|
||||
"descending_active": 0,
|
||||
"descending_rate_hz": 0.0,
|
||||
"descending_spikes": 0,
|
||||
"feature_norm": 0.0,
|
||||
"motor_active": 0,
|
||||
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|
||||
"motor_spikes": 0,
|
||||
"pattern": "dense",
|
||||
"seed": 44301
|
||||
},
|
||||
{
|
||||
"active_channels": 5927,
|
||||
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|
||||
"descending_rate_hz": 0.0,
|
||||
"descending_spikes": 0,
|
||||
"feature_norm": 0.0,
|
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"motor_active": 0,
|
||||
"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
||||
"pattern": "dense",
|
||||
"seed": 44302
|
||||
},
|
||||
{
|
||||
"active_channels": 5927,
|
||||
"descending_active": 0,
|
||||
"descending_rate_hz": 0.0,
|
||||
"descending_spikes": 0,
|
||||
"feature_norm": 0.0,
|
||||
"motor_active": 0,
|
||||
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|
||||
"motor_spikes": 0,
|
||||
"pattern": "dense",
|
||||
"seed": 44303
|
||||
},
|
||||
{
|
||||
"active_channels": 1185,
|
||||
"descending_active": 0,
|
||||
"descending_rate_hz": 0.0,
|
||||
"descending_spikes": 0,
|
||||
"feature_norm": 0.0,
|
||||
"motor_active": 0,
|
||||
"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
||||
"pattern": "moving",
|
||||
"seed": 44301
|
||||
},
|
||||
{
|
||||
"active_channels": 1185,
|
||||
"descending_active": 0,
|
||||
"descending_rate_hz": 0.0,
|
||||
"descending_spikes": 0,
|
||||
"feature_norm": 0.0,
|
||||
"motor_active": 0,
|
||||
"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
||||
"pattern": "moving",
|
||||
"seed": 44302
|
||||
},
|
||||
{
|
||||
"active_channels": 1185,
|
||||
"descending_active": 0,
|
||||
"descending_rate_hz": 0.0,
|
||||
"descending_spikes": 0,
|
||||
"feature_norm": 0.0,
|
||||
"motor_active": 0,
|
||||
"motor_rate_hz": 0.0,
|
||||
"motor_spikes": 0,
|
||||
"pattern": "moving",
|
||||
"seed": 44303
|
||||
}
|
||||
],
|
||||
"within_condition_distance_mean": 0.0
|
||||
}
|
||||
@@ -0,0 +1,23 @@
|
||||
{
|
||||
"engineering-first-order": {
|
||||
"biological_fidelity": "engineering_adapter",
|
||||
"count": 23707,
|
||||
"hierarchy_population": "first_order",
|
||||
"input_mode": "external_synaptic_drive",
|
||||
"membership_file": "/data/digital-drosophila/experiments/phase4d-io/visual-adapter/engineering-first-order.parquet"
|
||||
},
|
||||
"engineering-second-order": {
|
||||
"biological_fidelity": "engineering_adapter",
|
||||
"count": 81483,
|
||||
"hierarchy_population": "second_order",
|
||||
"input_mode": "external_synaptic_drive",
|
||||
"membership_file": "/data/digital-drosophila/experiments/phase4d-io/visual-adapter/engineering-second-order.parquet"
|
||||
},
|
||||
"reference-photoreceptor": {
|
||||
"biological_fidelity": "reference_comparison_only",
|
||||
"count": 6091,
|
||||
"hierarchy_population": "visual_sensory",
|
||||
"input_mode": "spike_injection",
|
||||
"membership_file": "/data/digital-drosophila/experiments/phase4d-io/visual-adapter/reference-photoreceptor.parquet"
|
||||
}
|
||||
}
|
||||
Reference in New Issue
Block a user