Audit calyx-specific PN contact scope without changing frozen baseline
This commit is contained in:
Digital Drosophila Archive
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||||
"sha256": "2ec053136d7744a8f158a1028d3e35a9e11424c402fb588ec977920a2c310a67",
|
||||
"source": "experiments/phase4ab-terminal-scope/regression/fixed-event-replay.json"
|
||||
},
|
||||
{
|
||||
"bytes": 1025,
|
||||
"copy": "evidence/regression/preflight.json",
|
||||
"sha256": "22e3f76d2971117550a43438ec4c12e6f592dc6d8a55b6abae6f31c06056b408",
|
||||
"source": "experiments/phase4ab-terminal-scope/regression/preflight.json"
|
||||
},
|
||||
{
|
||||
"bytes": 94,
|
||||
"copy": "evidence/regression/restored.json",
|
||||
"sha256": "d5e28ea53f1b2da7050ca66e4159a430fe330e9ff349ee95cd2e39c2402be99e",
|
||||
"source": "experiments/phase4ab-terminal-scope/regression/restored.json"
|
||||
},
|
||||
{
|
||||
"bytes": 396,
|
||||
"copy": "evidence/regression/run-start.json",
|
||||
"sha256": "4f6287aaf4324986a8c41bdbf06b784ab1d612558fa1204d1a587108788f63f4",
|
||||
"source": "experiments/phase4ab-terminal-scope/regression/run-start.json"
|
||||
},
|
||||
{
|
||||
"bytes": 773,
|
||||
"copy": "evidence/regression/unit-tests.json",
|
||||
"sha256": "7039bb7de7c47f6b2fd29ce7ab8bc86aebd0266579f5abc9518d1f4dc8a21644",
|
||||
"source": "experiments/phase4ab-terminal-scope/regression/unit-tests.json"
|
||||
},
|
||||
{
|
||||
"bytes": 2511,
|
||||
"copy": "evidence/replay/fixed-event-scope.csv",
|
||||
"sha256": "ae083713cc4b4da9c54d1184889c953e0a8673dcd4c9ad466058d92a2418252e",
|
||||
"source": "experiments/phase4ab-terminal-scope/replay/fixed-event-scope.csv"
|
||||
}
|
||||
]
|
||||
@@ -0,0 +1,36 @@
|
||||
# Phase 4AB 机制解读
|
||||
|
||||
正式状态：**COMPLETE-SCOPE-COUNTERFACTUAL / NO-DYNAMICS-CANDIDATE**。
|
||||
|
||||
这一轮区分了“PN→KC 传入位置”与“维持 PN 放电的上游反馈”。没有修复或批准新的 APL 生理模型，也没有训练。
|
||||
|
||||
| 诊断范围 | 活跃 KC（6 个旧气味） | 目标 KC 晚期 spikes | VA6 PN 晚期 spikes |
|
||||
|---|---:|---:|---:|
|
||||
| 原模型 | 139–172 | 60–61 | 212–214 |
|
||||
| 仅明确 calyx 接触 | 1–2 | 0 | 212–214 |
|
||||
| 同批 PN 的全部 KC 输出 | 1 | 0 | 212–214 |
|
||||
| 同批 PN 的全部快速输出 | 0 | 0 | 0 |
|
||||
|
||||
晚期窗口是 500–1,000 ms。每个气味沿用 seed 131101；总计 24 组诊断、4 次精确重复，不是 5-seed 学习验证。
|
||||
|
||||
## 能说明什么
|
||||
|
||||
仅 calyx 接触阻断后，目标 KC82312 的晚期 spikes 范围为 0，VA6 仍为 212–214。
|
||||
同时 KC 总活跃数降为 1–2，原模型为 139–172。不能把这种接近静默的结果包装成编码或记忆改善。
|
||||
即使两个局部阻断条件的事件序列相同，其电压/g 仍可能不同；逐气味比较见 narrow-vs-allKC.csv。
|
||||
宽范围 PN 快速输出阻断影响反馈路径，不等价于局部 calyx 调制；它也没有关闭 PN 胞体或 frozen graded APL 的 PN 输入。
|
||||
|
||||
## 仍不能说明什么
|
||||
|
||||
完全阻断只是工程极端对照，不是 APL 的实测释放抑制比例。没有估计 receptor、bouton、局部扩散范围或时间常数。
|
||||
未使用 held-out 气味，未检验学习、保持、反转或动作输出。不得选取这次“让活动更少”的操作作为正式脑模型。
|
||||
剩余 late KC 的 ID/type 已单独保存；其来源不能仅凭残余计数猜测。
|
||||
|
||||
## 下一步边界
|
||||
|
||||
先继续 upstream feedback / compartment-specific physiology 的证据约束，区分 calyx 信号传递与触角叶持续放电，再确定可检验的局部动力学假设。
|
||||
不能靠增加整体抑制、调 eta/threshold、扩大 plastic mask 或让 KC 全静默宣称修复。当前不进入学习、游戏或视觉。
|
||||
|
||||
相关原始研究：[Prisco et al., 2021](https://doi.org/10.7554/eLife.74172)、[Amin et al., 2020](https://doi.org/10.7554/eLife.56954)。它们支持研究局部 APL 作用，不直接验证本实验完全阻断幅度。
|
||||
|
||||
顶层验收仍为 5/10（50%）；本轮推进的是机制定位与可重复诊断能力。最终完整性状态见 regression/final-integrity.json。
|
||||
@@ -0,0 +1,52 @@
|
||||
# Phase 4AB — calyx contact-scope diagnostic
|
||||
|
||||
Status: COMPLETE-SCOPE-COUNTERFACTUAL / NO-DYNAMICS-CANDIDATE.
|
||||
Diagnostic interventions only; no calibrated biological inhibition, no training, no parameter winner.
|
||||
|
||||
Eligible PNs: 229/259. CA mask: 20263 edges / 337099 contacts.
|
||||
Affected KCs: 3760. Mixed-ROI affected edges: 3323; retained other contacts: 28975.
|
||||
Broader PN→KC control: 21882 edges / 384555 contacts. All-fast-PN-output control: 116211 edges / 1268111 contacts.
|
||||
|
||||
| Odor | Condition | Active KC | KC late spikes | KC82312 late | VA6 late |
|
||||
|---|---|---:|---:|---:|---:|
|
||||
| ethyl (R)-(-)-3-hydroxybutanoate | frozen_reference | 160 | 114 | 60 | 213 |
|
||||
| ethyl (R)-(-)-3-hydroxybutanoate | calyx_PN_KC_contact_block | 1 | 39 | 0 | 214 |
|
||||
| ethyl (R)-(-)-3-hydroxybutanoate | all_PN_KC_block | 1 | 39 | 0 | 214 |
|
||||
| ethyl (R)-(-)-3-hydroxybutanoate | whole_PN_output_block | 0 | 0 | 0 | 0 |
|
||||
| 3-penten-2-one | frozen_reference | 172 | 118 | 60 | 213 |
|
||||
| 3-penten-2-one | calyx_PN_KC_contact_block | 2 | 39 | 0 | 213 |
|
||||
| 3-penten-2-one | all_PN_KC_block | 1 | 39 | 0 | 213 |
|
||||
| 3-penten-2-one | whole_PN_output_block | 0 | 0 | 0 | 0 |
|
||||
| (2R)-hexan-2-ol | frozen_reference | 144 | 117 | 61 | 213 |
|
||||
| (2R)-hexan-2-ol | calyx_PN_KC_contact_block | 1 | 39 | 0 | 213 |
|
||||
| (2R)-hexan-2-ol | all_PN_KC_block | 1 | 39 | 0 | 213 |
|
||||
| (2R)-hexan-2-ol | whole_PN_output_block | 0 | 0 | 0 | 0 |
|
||||
| gamma-propyl-gamma-butyrolactone | frozen_reference | 151 | 117 | 60 | 212 |
|
||||
| gamma-propyl-gamma-butyrolactone | calyx_PN_KC_contact_block | 2 | 39 | 0 | 212 |
|
||||
| gamma-propyl-gamma-butyrolactone | all_PN_KC_block | 1 | 40 | 0 | 212 |
|
||||
| gamma-propyl-gamma-butyrolactone | whole_PN_output_block | 0 | 0 | 0 | 0 |
|
||||
| 2-methyl butyl acetate | frozen_reference | 139 | 118 | 61 | 213 |
|
||||
| 2-methyl butyl acetate | calyx_PN_KC_contact_block | 1 | 39 | 0 | 212 |
|
||||
| 2-methyl butyl acetate | all_PN_KC_block | 1 | 39 | 0 | 212 |
|
||||
| 2-methyl butyl acetate | whole_PN_output_block | 0 | 0 | 0 | 0 |
|
||||
| ethyl (S)-(+)-3-hydroxybutanoate | frozen_reference | 163 | 119 | 61 | 214 |
|
||||
| ethyl (S)-(+)-3-hydroxybutanoate | calyx_PN_KC_contact_block | 1 | 39 | 0 | 214 |
|
||||
| ethyl (S)-(+)-3-hydroxybutanoate | all_PN_KC_block | 1 | 39 | 0 | 214 |
|
||||
| ethyl (S)-(+)-3-hydroxybutanoate | whole_PN_output_block | 0 | 0 | 0 | 0 |
|
||||
|
||||
Late means 500–1,000 ms; 120 ms old calibration odor input; one seed, six old odors. No held-out generalization claim.
|
||||
Identical scheduled requests across conditions. Delivered request-associated output differences versus reference: 459 (summed over all comparisons). See per-trial table; this is state/refractory feedback, not a changed RNG.
|
||||
|
||||
## Interpretation limits
|
||||
|
||||
CA selection uses exact primary_post labels plus matched APL→PN/ROI metadata, not bouton identities or inferred receptors. Unknown ROIs are not reclassified.
|
||||
Whole-PN control removes fast output, not somatic spikes or the frozen graded APL input. It is not a complete PN knockout.
|
||||
Reduction/silencing is not restored information or associative memory. No condition becomes a formal model. Fixed-event replay freezes other recorded events/APL; dynamic trials allow natural recurrent feedback.
|
||||
Local-inhibition motivation: [Prisco et al.](https://doi.org/10.7554/eLife.74172), [Amin et al.](https://doi.org/10.7554/eLife.56954). These sources do not establish the complete-block operator as physiological.
|
||||
|
||||
## Verification
|
||||
|
||||
Six original trials reproduced exactly (whole spike events, watched state and final counts/V/g). Four first-odor repeats exact. Five deterministic-v2 frozen reference trials exact. Finite state throughout.
|
||||
Original 230,239 files and both Phase 4AA manifests rechecked before/after. Base CSR/count/sign, frozen LIF/APL, eligibility-v2 and 14,232 plastic mask preserved.
|
||||
Timing includes diagnostic CPU/GPU observation overhead and is not a runtime speed benchmark. ComfyUI was not stopped or unloaded.
|
||||
Top-level acceptance gates remain 5/10 (50%); anatomical diagnosis is not evidence of learning success.
|
||||
@@ -0,0 +1,12 @@
|
||||
primary_post,in_scope,contacts
|
||||
CA(L),False,927
|
||||
CA(L),True,152627
|
||||
CA(R),False,11
|
||||
CA(R),True,184472
|
||||
LH(L),False,15
|
||||
PLP(L),False,14
|
||||
SCL(L),False,792
|
||||
SCL(R),False,140
|
||||
SLP(R),False,57
|
||||
SMP(L),False,15
|
||||
CentralBrain-unspecified,False,46159
|
||||
|
@@ -0,0 +1,5 @@
|
||||
condition,whole_spikes_min,whole_spikes_max,KC_active_min,KC_active_max,KC_spikes_min,KC_spikes_max,KC_late_spikes_min,KC_late_spikes_max,KC82312_late_spikes_min,KC82312_late_spikes_max,VA6_late_spikes_min,VA6_late_spikes_max,wall_seconds_min,wall_seconds_max
|
||||
frozen_reference,1102887.0,1113472.0,139.0,172.0,372.0,408.0,114.0,119.0,60.0,61.0,212.0,214.0,14.812315593997482,15.05500110599678
|
||||
calyx_PN_KC_contact_block,1096632.0,1112931.0,1.0,2.0,72.0,73.0,39.0,39.0,0.0,0.0,212.0,214.0,14.777685339009622,14.96407428199018
|
||||
all_PN_KC_block,1096632.0,1112931.0,1.0,1.0,72.0,73.0,39.0,40.0,0.0,0.0,212.0,214.0,14.785283767996589,14.836084023001604
|
||||
whole_PN_output_block,72.0,188.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,9.320402383003966,9.454139529989334
|
||||
|
@@ -0,0 +1,20 @@
|
||||
{
|
||||
"ComfyUI_queues": [
|
||||
{
|
||||
"pending": 0,
|
||||
"port": 8188,
|
||||
"running": 0
|
||||
},
|
||||
{
|
||||
"pending": 0,
|
||||
"port": 8189,
|
||||
"running": 0
|
||||
},
|
||||
{
|
||||
"pending": 0,
|
||||
"port": 8190,
|
||||
"running": 0
|
||||
}
|
||||
],
|
||||
"services_stopped": false
|
||||
}
|
||||
@@ -0,0 +1,30 @@
|
||||
{
|
||||
"candidate": false,
|
||||
"frozen_baseline_modified": false,
|
||||
"integrity_pass": true,
|
||||
"preserved_acceptance_gates": "5/10",
|
||||
"reference_pass": true,
|
||||
"scope": {
|
||||
"APL_target_PNs": 259,
|
||||
"all_PN_KC_contacts": 384555,
|
||||
"all_PN_KC_edges": 21882,
|
||||
"biophysical_coefficient_known": false,
|
||||
"calyx_affected_KCs": 3760,
|
||||
"calyx_blocked_contacts": 337099,
|
||||
"calyx_mask_edges": 20263,
|
||||
"calyx_other_contacts_retained_on_affected_edges": 28975,
|
||||
"edges": 25582938,
|
||||
"eligible_PNs": 229,
|
||||
"ineligible_PNs": 30,
|
||||
"mixed_CA_nonCA_edges": 3323,
|
||||
"neurons": 166700,
|
||||
"raw_contacts": 124177617,
|
||||
"same_bouton_confirmed": false,
|
||||
"unknown_ROI_contacts_in_original_PN_KC": 46159,
|
||||
"unknown_contacts_relabelled": 0,
|
||||
"whole_PN_contacts": 1268111,
|
||||
"whole_PN_edges": 116211
|
||||
},
|
||||
"status": "COMPLETE-SCOPE-COUNTERFACTUAL / NO-DYNAMICS-CANDIDATE",
|
||||
"training": false
|
||||
}
|
||||
@@ -0,0 +1,19 @@
|
||||
{
|
||||
"CA_block_ALLN_watched_late_rate_range_hz": [
|
||||
454.0,
|
||||
456.0
|
||||
],
|
||||
"CA_block_active_KC_range": [
|
||||
1,
|
||||
2
|
||||
],
|
||||
"CA_vs_allKC_spike_sequence_exact_for_all_odors": false,
|
||||
"all_six_CA_block_VA6_late_persists": true,
|
||||
"all_six_CA_block_targetKC_late_zero": true,
|
||||
"all_six_broad_block_KC_and_VA6_late_zero": true,
|
||||
"new_candidate": false,
|
||||
"not_a_memory_or_separability_success": true,
|
||||
"not_a_physiological_APL_gain_estimate": true,
|
||||
"posthoc_summary_not_new_experiment": true,
|
||||
"source_sha256": "33ba5f323e9ed3343f43a8d64fb7e862c8a4f1118b9b441f4745e26cc14303a8"
|
||||
}
|
||||
@@ -0,0 +1,7 @@
|
||||
odor_index,terminal_vs_allKC_events_exact,counts_exact,max_V_difference,max_g_difference
|
||||
0,True,True,59.083824157714844,66.9503173828125
|
||||
1,False,False,232.58389282226562,346.2290802001953
|
||||
2,True,True,59.49408721923828,60.36189270019531
|
||||
3,False,False,173.94474029541016,486.3127136230469
|
||||
4,True,True,59.40711975097656,59.434303283691406
|
||||
5,True,True,59.37791442871094,58.91309356689453
|
||||
|
@@ -0,0 +1,241 @@
|
||||
trial,population,neurons,active,spikes,late_spikes
|
||||
0-131101-frozen_reference,ALLN,420,388,111462,56532
|
||||
0-131101-frozen_reference,ALPN,686,573,126794,64388
|
||||
0-131101-frozen_reference,APL,2,2,898,454
|
||||
0-131101-frozen_reference,DAN,340,133,10825,5631
|
||||
0-131101-frozen_reference,DPM,2,2,738,376
|
||||
0-131101-frozen_reference,KC,4064,160,384,114
|
||||
0-131101-frozen_reference,MBON,97,66,10545,5405
|
||||
0-131101-frozen_reference,PN_olfactory_annotation,2639,54,3217,1665
|
||||
0-131101-frozen_reference,dopamine_metadata_role_unknown,52,48,5907,3127
|
||||
0-131101-frozen_reference,other_annotation,158398,12975,840820,429844
|
||||
0-131101-calyx_PN_KC_contact_block,ALLN,420,388,111462,56539
|
||||
0-131101-calyx_PN_KC_contact_block,ALPN,686,573,126817,64399
|
||||
0-131101-calyx_PN_KC_contact_block,APL,2,2,897,455
|
||||
0-131101-calyx_PN_KC_contact_block,DAN,340,134,10738,5648
|
||||
0-131101-calyx_PN_KC_contact_block,DPM,2,2,718,376
|
||||
0-131101-calyx_PN_KC_contact_block,KC,4064,1,72,39
|
||||
0-131101-calyx_PN_KC_contact_block,MBON,97,62,10335,5403
|
||||
0-131101-calyx_PN_KC_contact_block,PN_olfactory_annotation,2639,53,3214,1660
|
||||
0-131101-calyx_PN_KC_contact_block,dopamine_metadata_role_unknown,52,50,5937,3092
|
||||
0-131101-calyx_PN_KC_contact_block,other_annotation,158398,13391,838005,431222
|
||||
0-131101-all_PN_KC_block,ALLN,420,388,111462,56539
|
||||
0-131101-all_PN_KC_block,ALPN,686,573,126817,64399
|
||||
0-131101-all_PN_KC_block,APL,2,2,897,455
|
||||
0-131101-all_PN_KC_block,DAN,340,134,10738,5648
|
||||
0-131101-all_PN_KC_block,DPM,2,2,718,376
|
||||
0-131101-all_PN_KC_block,KC,4064,1,72,39
|
||||
0-131101-all_PN_KC_block,MBON,97,62,10335,5403
|
||||
0-131101-all_PN_KC_block,PN_olfactory_annotation,2639,53,3214,1660
|
||||
0-131101-all_PN_KC_block,dopamine_metadata_role_unknown,52,50,5937,3092
|
||||
0-131101-all_PN_KC_block,other_annotation,158398,13391,838005,431222
|
||||
0-131101-whole_PN_output_block,ALLN,420,0,0,0
|
||||
0-131101-whole_PN_output_block,ALPN,686,41,126,0
|
||||
0-131101-whole_PN_output_block,APL,2,0,0,0
|
||||
0-131101-whole_PN_output_block,DAN,340,0,0,0
|
||||
0-131101-whole_PN_output_block,DPM,2,0,0,0
|
||||
0-131101-whole_PN_output_block,KC,4064,0,0,0
|
||||
0-131101-whole_PN_output_block,MBON,97,0,0,0
|
||||
0-131101-whole_PN_output_block,PN_olfactory_annotation,2639,0,0,0
|
||||
0-131101-whole_PN_output_block,dopamine_metadata_role_unknown,52,0,0,0
|
||||
0-131101-whole_PN_output_block,other_annotation,158398,0,0,0
|
||||
1-131101-frozen_reference,ALLN,420,386,111149,56510
|
||||
1-131101-frozen_reference,ALPN,686,575,126477,64377
|
||||
1-131101-frozen_reference,APL,2,2,896,454
|
||||
1-131101-frozen_reference,DAN,340,135,10828,5658
|
||||
1-131101-frozen_reference,DPM,2,2,738,376
|
||||
1-131101-frozen_reference,KC,4064,172,408,118
|
||||
1-131101-frozen_reference,MBON,97,64,10551,5408
|
||||
1-131101-frozen_reference,PN_olfactory_annotation,2639,53,3198,1661
|
||||
1-131101-frozen_reference,dopamine_metadata_role_unknown,52,48,5836,3066
|
||||
1-131101-frozen_reference,other_annotation,158398,12679,835147,430753
|
||||
1-131101-calyx_PN_KC_contact_block,ALLN,420,386,111166,56517
|
||||
1-131101-calyx_PN_KC_contact_block,ALPN,686,575,126464,64367
|
||||
1-131101-calyx_PN_KC_contact_block,APL,2,2,894,454
|
||||
1-131101-calyx_PN_KC_contact_block,DAN,340,135,10685,5656
|
||||
1-131101-calyx_PN_KC_contact_block,DPM,2,2,715,376
|
||||
1-131101-calyx_PN_KC_contact_block,KC,4064,2,73,39
|
||||
1-131101-calyx_PN_KC_contact_block,MBON,97,62,10304,5398
|
||||
1-131101-calyx_PN_KC_contact_block,PN_olfactory_annotation,2639,53,3199,1662
|
||||
1-131101-calyx_PN_KC_contact_block,dopamine_metadata_role_unknown,52,50,5988,3120
|
||||
1-131101-calyx_PN_KC_contact_block,other_annotation,158398,13097,832489,430551
|
||||
1-131101-all_PN_KC_block,ALLN,420,386,111184,56531
|
||||
1-131101-all_PN_KC_block,ALPN,686,575,126471,64363
|
||||
1-131101-all_PN_KC_block,APL,2,2,894,454
|
||||
1-131101-all_PN_KC_block,DAN,340,135,10680,5653
|
||||
1-131101-all_PN_KC_block,DPM,2,2,715,376
|
||||
1-131101-all_PN_KC_block,KC,4064,1,72,39
|
||||
1-131101-all_PN_KC_block,MBON,97,62,10322,5406
|
||||
1-131101-all_PN_KC_block,PN_olfactory_annotation,2639,53,3194,1655
|
||||
1-131101-all_PN_KC_block,dopamine_metadata_role_unknown,52,50,5942,3110
|
||||
1-131101-all_PN_KC_block,other_annotation,158398,13007,836163,431478
|
||||
1-131101-whole_PN_output_block,ALLN,420,0,0,0
|
||||
1-131101-whole_PN_output_block,ALPN,686,39,161,0
|
||||
1-131101-whole_PN_output_block,APL,2,0,0,0
|
||||
1-131101-whole_PN_output_block,DAN,340,0,0,0
|
||||
1-131101-whole_PN_output_block,DPM,2,0,0,0
|
||||
1-131101-whole_PN_output_block,KC,4064,0,0,0
|
||||
1-131101-whole_PN_output_block,MBON,97,0,0,0
|
||||
1-131101-whole_PN_output_block,PN_olfactory_annotation,2639,0,0,0
|
||||
1-131101-whole_PN_output_block,dopamine_metadata_role_unknown,52,0,0,0
|
||||
1-131101-whole_PN_output_block,other_annotation,158398,0,0,0
|
||||
2-131101-frozen_reference,ALLN,420,386,111332,56527
|
||||
2-131101-frozen_reference,ALPN,686,577,126658,64397
|
||||
2-131101-frozen_reference,APL,2,2,899,454
|
||||
2-131101-frozen_reference,DAN,340,133,10885,5658
|
||||
2-131101-frozen_reference,DPM,2,2,738,376
|
||||
2-131101-frozen_reference,KC,4064,144,381,117
|
||||
2-131101-frozen_reference,MBON,97,60,10553,5414
|
||||
2-131101-frozen_reference,PN_olfactory_annotation,2639,53,3208,1661
|
||||
2-131101-frozen_reference,dopamine_metadata_role_unknown,52,50,5923,3083
|
||||
2-131101-frozen_reference,other_annotation,158398,13110,840199,429145
|
||||
2-131101-calyx_PN_KC_contact_block,ALLN,420,386,111307,56511
|
||||
2-131101-calyx_PN_KC_contact_block,ALPN,686,577,126662,64387
|
||||
2-131101-calyx_PN_KC_contact_block,APL,2,2,898,455
|
||||
2-131101-calyx_PN_KC_contact_block,DAN,340,135,10680,5636
|
||||
2-131101-calyx_PN_KC_contact_block,DPM,2,2,719,376
|
||||
2-131101-calyx_PN_KC_contact_block,KC,4064,1,73,39
|
||||
2-131101-calyx_PN_KC_contact_block,MBON,97,62,10367,5405
|
||||
2-131101-calyx_PN_KC_contact_block,PN_olfactory_annotation,2639,53,3207,1662
|
||||
2-131101-calyx_PN_KC_contact_block,dopamine_metadata_role_unknown,52,50,5946,3109
|
||||
2-131101-calyx_PN_KC_contact_block,other_annotation,158398,13123,838495,430503
|
||||
2-131101-all_PN_KC_block,ALLN,420,386,111307,56511
|
||||
2-131101-all_PN_KC_block,ALPN,686,577,126662,64387
|
||||
2-131101-all_PN_KC_block,APL,2,2,898,455
|
||||
2-131101-all_PN_KC_block,DAN,340,135,10680,5636
|
||||
2-131101-all_PN_KC_block,DPM,2,2,719,376
|
||||
2-131101-all_PN_KC_block,KC,4064,1,73,39
|
||||
2-131101-all_PN_KC_block,MBON,97,62,10367,5405
|
||||
2-131101-all_PN_KC_block,PN_olfactory_annotation,2639,53,3207,1662
|
||||
2-131101-all_PN_KC_block,dopamine_metadata_role_unknown,52,50,5946,3109
|
||||
2-131101-all_PN_KC_block,other_annotation,158398,13123,838495,430503
|
||||
2-131101-whole_PN_output_block,ALLN,420,0,0,0
|
||||
2-131101-whole_PN_output_block,ALPN,686,28,111,0
|
||||
2-131101-whole_PN_output_block,APL,2,0,0,0
|
||||
2-131101-whole_PN_output_block,DAN,340,0,0,0
|
||||
2-131101-whole_PN_output_block,DPM,2,0,0,0
|
||||
2-131101-whole_PN_output_block,KC,4064,0,0,0
|
||||
2-131101-whole_PN_output_block,MBON,97,0,0,0
|
||||
2-131101-whole_PN_output_block,PN_olfactory_annotation,2639,0,0,0
|
||||
2-131101-whole_PN_output_block,dopamine_metadata_role_unknown,52,0,0,0
|
||||
2-131101-whole_PN_output_block,other_annotation,158398,0,0,0
|
||||
3-131101-frozen_reference,ALLN,420,386,110642,56491
|
||||
3-131101-frozen_reference,ALPN,686,575,125876,64358
|
||||
3-131101-frozen_reference,APL,2,2,892,454
|
||||
3-131101-frozen_reference,DAN,340,134,10781,5643
|
||||
3-131101-frozen_reference,DPM,2,2,735,377
|
||||
3-131101-frozen_reference,KC,4064,151,385,117
|
||||
3-131101-frozen_reference,MBON,97,61,10528,5447
|
||||
3-131101-frozen_reference,PN_olfactory_annotation,2639,53,3188,1663
|
||||
3-131101-frozen_reference,dopamine_metadata_role_unknown,52,50,5864,3088
|
||||
3-131101-frozen_reference,other_annotation,158398,12902,836062,432377
|
||||
3-131101-calyx_PN_KC_contact_block,ALLN,420,386,110635,56494
|
||||
3-131101-calyx_PN_KC_contact_block,ALPN,686,575,125840,64349
|
||||
3-131101-calyx_PN_KC_contact_block,APL,2,2,891,455
|
||||
3-131101-calyx_PN_KC_contact_block,DAN,340,134,10664,5658
|
||||
3-131101-calyx_PN_KC_contact_block,DPM,2,2,715,376
|
||||
3-131101-calyx_PN_KC_contact_block,KC,4064,2,73,39
|
||||
3-131101-calyx_PN_KC_contact_block,MBON,97,62,10285,5411
|
||||
3-131101-calyx_PN_KC_contact_block,PN_olfactory_annotation,2639,53,3182,1656
|
||||
3-131101-calyx_PN_KC_contact_block,dopamine_metadata_role_unknown,52,50,5872,3073
|
||||
3-131101-calyx_PN_KC_contact_block,other_annotation,158398,13086,830844,431059
|
||||
3-131101-all_PN_KC_block,ALLN,420,386,110646,56489
|
||||
3-131101-all_PN_KC_block,ALPN,686,575,125875,64350
|
||||
3-131101-all_PN_KC_block,APL,2,2,892,456
|
||||
3-131101-all_PN_KC_block,DAN,340,135,10625,5620
|
||||
3-131101-all_PN_KC_block,DPM,2,2,715,376
|
||||
3-131101-all_PN_KC_block,KC,4064,1,73,40
|
||||
3-131101-all_PN_KC_block,MBON,97,62,10317,5426
|
||||
3-131101-all_PN_KC_block,PN_olfactory_annotation,2639,53,3187,1664
|
||||
3-131101-all_PN_KC_block,dopamine_metadata_role_unknown,52,50,5882,3091
|
||||
3-131101-all_PN_KC_block,other_annotation,158398,13020,836110,434403
|
||||
3-131101-whole_PN_output_block,ALLN,420,0,0,0
|
||||
3-131101-whole_PN_output_block,ALPN,686,34,91,0
|
||||
3-131101-whole_PN_output_block,APL,2,0,0,0
|
||||
3-131101-whole_PN_output_block,DAN,340,0,0,0
|
||||
3-131101-whole_PN_output_block,DPM,2,0,0,0
|
||||
3-131101-whole_PN_output_block,KC,4064,0,0,0
|
||||
3-131101-whole_PN_output_block,MBON,97,0,0,0
|
||||
3-131101-whole_PN_output_block,PN_olfactory_annotation,2639,0,0,0
|
||||
3-131101-whole_PN_output_block,dopamine_metadata_role_unknown,52,0,0,0
|
||||
3-131101-whole_PN_output_block,other_annotation,158398,0,0,0
|
||||
4-131101-frozen_reference,ALLN,420,386,110608,56506
|
||||
4-131101-frozen_reference,ALPN,686,572,125803,64341
|
||||
4-131101-frozen_reference,APL,2,2,893,455
|
||||
4-131101-frozen_reference,DAN,340,137,10770,5637
|
||||
4-131101-frozen_reference,DPM,2,2,733,377
|
||||
4-131101-frozen_reference,KC,4064,139,372,118
|
||||
4-131101-frozen_reference,MBON,97,62,10511,5436
|
||||
4-131101-frozen_reference,PN_olfactory_annotation,2639,53,3173,1651
|
||||
4-131101-frozen_reference,dopamine_metadata_role_unknown,52,50,5830,3100
|
||||
4-131101-frozen_reference,other_annotation,158398,12636,834194,433020
|
||||
4-131101-calyx_PN_KC_contact_block,ALLN,420,386,110587,56496
|
||||
4-131101-calyx_PN_KC_contact_block,ALPN,686,572,125776,64340
|
||||
4-131101-calyx_PN_KC_contact_block,APL,2,2,891,454
|
||||
4-131101-calyx_PN_KC_contact_block,DAN,340,137,10650,5651
|
||||
4-131101-calyx_PN_KC_contact_block,DPM,2,2,715,377
|
||||
4-131101-calyx_PN_KC_contact_block,KC,4064,1,72,39
|
||||
4-131101-calyx_PN_KC_contact_block,MBON,97,62,10286,5421
|
||||
4-131101-calyx_PN_KC_contact_block,PN_olfactory_annotation,2639,53,3170,1650
|
||||
4-131101-calyx_PN_KC_contact_block,dopamine_metadata_role_unknown,52,51,5851,3113
|
||||
4-131101-calyx_PN_KC_contact_block,other_annotation,158398,12800,828634,430658
|
||||
4-131101-all_PN_KC_block,ALLN,420,386,110587,56496
|
||||
4-131101-all_PN_KC_block,ALPN,686,572,125776,64340
|
||||
4-131101-all_PN_KC_block,APL,2,2,891,454
|
||||
4-131101-all_PN_KC_block,DAN,340,137,10650,5651
|
||||
4-131101-all_PN_KC_block,DPM,2,2,715,377
|
||||
4-131101-all_PN_KC_block,KC,4064,1,72,39
|
||||
4-131101-all_PN_KC_block,MBON,97,62,10286,5421
|
||||
4-131101-all_PN_KC_block,PN_olfactory_annotation,2639,53,3170,1650
|
||||
4-131101-all_PN_KC_block,dopamine_metadata_role_unknown,52,51,5851,3113
|
||||
4-131101-all_PN_KC_block,other_annotation,158398,12800,828634,430658
|
||||
4-131101-whole_PN_output_block,ALLN,420,0,0,0
|
||||
4-131101-whole_PN_output_block,ALPN,686,25,72,0
|
||||
4-131101-whole_PN_output_block,APL,2,0,0,0
|
||||
4-131101-whole_PN_output_block,DAN,340,0,0,0
|
||||
4-131101-whole_PN_output_block,DPM,2,0,0,0
|
||||
4-131101-whole_PN_output_block,KC,4064,0,0,0
|
||||
4-131101-whole_PN_output_block,MBON,97,0,0,0
|
||||
4-131101-whole_PN_output_block,PN_olfactory_annotation,2639,0,0,0
|
||||
4-131101-whole_PN_output_block,dopamine_metadata_role_unknown,52,0,0,0
|
||||
4-131101-whole_PN_output_block,other_annotation,158398,0,0,0
|
||||
5-131101-frozen_reference,ALLN,420,389,111255,56552
|
||||
5-131101-frozen_reference,ALPN,686,576,126597,64420
|
||||
5-131101-frozen_reference,APL,2,2,898,455
|
||||
5-131101-frozen_reference,DAN,340,134,10834,5653
|
||||
5-131101-frozen_reference,DPM,2,2,737,377
|
||||
5-131101-frozen_reference,KC,4064,163,395,119
|
||||
5-131101-frozen_reference,MBON,97,63,10588,5428
|
||||
5-131101-frozen_reference,PN_olfactory_annotation,2639,53,3211,1657
|
||||
5-131101-frozen_reference,dopamine_metadata_role_unknown,52,51,5895,3093
|
||||
5-131101-frozen_reference,other_annotation,158398,13146,843062,432870
|
||||
5-131101-calyx_PN_KC_contact_block,ALLN,420,389,111261,56537
|
||||
5-131101-calyx_PN_KC_contact_block,ALPN,686,576,126621,64416
|
||||
5-131101-calyx_PN_KC_contact_block,APL,2,2,896,455
|
||||
5-131101-calyx_PN_KC_contact_block,DAN,340,134,10718,5654
|
||||
5-131101-calyx_PN_KC_contact_block,DPM,2,2,718,376
|
||||
5-131101-calyx_PN_KC_contact_block,KC,4064,1,72,39
|
||||
5-131101-calyx_PN_KC_contact_block,MBON,97,62,10352,5414
|
||||
5-131101-calyx_PN_KC_contact_block,PN_olfactory_annotation,2639,53,3212,1661
|
||||
5-131101-calyx_PN_KC_contact_block,dopamine_metadata_role_unknown,52,51,5929,3094
|
||||
5-131101-calyx_PN_KC_contact_block,other_annotation,158398,13624,843152,429784
|
||||
5-131101-all_PN_KC_block,ALLN,420,389,111261,56537
|
||||
5-131101-all_PN_KC_block,ALPN,686,576,126621,64416
|
||||
5-131101-all_PN_KC_block,APL,2,2,896,455
|
||||
5-131101-all_PN_KC_block,DAN,340,134,10718,5654
|
||||
5-131101-all_PN_KC_block,DPM,2,2,718,376
|
||||
5-131101-all_PN_KC_block,KC,4064,1,72,39
|
||||
5-131101-all_PN_KC_block,MBON,97,62,10352,5414
|
||||
5-131101-all_PN_KC_block,PN_olfactory_annotation,2639,53,3212,1661
|
||||
5-131101-all_PN_KC_block,dopamine_metadata_role_unknown,52,51,5929,3094
|
||||
5-131101-all_PN_KC_block,other_annotation,158398,13624,843152,429784
|
||||
5-131101-whole_PN_output_block,ALLN,420,0,0,0
|
||||
5-131101-whole_PN_output_block,ALPN,686,40,188,0
|
||||
5-131101-whole_PN_output_block,APL,2,0,0,0
|
||||
5-131101-whole_PN_output_block,DAN,340,0,0,0
|
||||
5-131101-whole_PN_output_block,DPM,2,0,0,0
|
||||
5-131101-whole_PN_output_block,KC,4064,0,0,0
|
||||
5-131101-whole_PN_output_block,MBON,97,0,0,0
|
||||
5-131101-whole_PN_output_block,PN_olfactory_annotation,2639,0,0,0
|
||||
5-131101-whole_PN_output_block,dopamine_metadata_role_unknown,52,0,0,0
|
||||
5-131101-whole_PN_output_block,other_annotation,158398,0,0,0
|
||||
|
@@ -0,0 +1,7 @@
|
||||
odor_index,neuron_idx,body_id,type,late_spikes,first_late_spike_ms,last_spike_ms,source_identity_not_inferred_from_this_count
|
||||
0,78836,104513,KCg-d,39,502.6,999.4,True
|
||||
1,78836,104513,KCg-d,39,500.5,992.5,True
|
||||
2,78836,104513,KCg-d,39,509.9,996.4,True
|
||||
3,78836,104513,KCg-d,39,500.4,995.8,True
|
||||
4,78836,104513,KCg-d,39,508.6,998.5,True
|
||||
5,78836,104513,KCg-d,39,506.1,994.9,True
|
||||
|
@@ -0,0 +1,25 @@
|
||||
trial,scheduled,identical_request_keys,accepted,blocked,preexisting,status_differences_vs_reference,actual_output_differences_vs_reference
|
||||
0-131101-frozen_reference,131,True,75,54,2,0,0
|
||||
0-131101-calyx_PN_KC_contact_block,131,True,73,53,5,7,5
|
||||
0-131101-all_PN_KC_block,131,True,73,53,5,7,5
|
||||
0-131101-whole_PN_output_block,131,True,126,5,0,55,53
|
||||
1-131101-frozen_reference,186,True,77,102,7,0,0
|
||||
1-131101-calyx_PN_KC_contact_block,186,True,78,101,7,15,11
|
||||
1-131101-all_PN_KC_block,186,True,82,98,6,12,8
|
||||
1-131101-whole_PN_output_block,186,True,161,25,0,88,83
|
||||
2-131101-frozen_reference,122,True,54,66,2,0,0
|
||||
2-131101-calyx_PN_KC_contact_block,122,True,52,70,0,8,6
|
||||
2-131101-all_PN_KC_block,122,True,52,70,0,8,6
|
||||
2-131101-whole_PN_output_block,122,True,111,11,0,59,57
|
||||
3-131101-frozen_reference,95,True,41,54,0,0,0
|
||||
3-131101-calyx_PN_KC_contact_block,95,True,41,54,0,2,2
|
||||
3-131101-all_PN_KC_block,95,True,41,54,0,2,2
|
||||
3-131101-whole_PN_output_block,95,True,91,4,0,52,52
|
||||
4-131101-frozen_reference,78,True,31,44,3,0,0
|
||||
4-131101-calyx_PN_KC_contact_block,78,True,30,44,4,8,8
|
||||
4-131101-all_PN_KC_block,78,True,30,44,4,8,8
|
||||
4-131101-whole_PN_output_block,78,True,72,6,0,43,40
|
||||
5-131101-frozen_reference,215,True,92,118,5,0,0
|
||||
5-131101-calyx_PN_KC_contact_block,215,True,90,119,6,13,7
|
||||
5-131101-all_PN_KC_block,215,True,90,119,6,13,7
|
||||
5-131101-whole_PN_output_block,215,True,188,27,0,104,99
|
||||
|
@@ -0,0 +1,9 @@
|
||||
{
|
||||
"all_finite": true,
|
||||
"candidate": false,
|
||||
"exact_repeat_trials": 4,
|
||||
"frozen_reference_trials": 5,
|
||||
"old_trial_reproductions": 6,
|
||||
"training": false,
|
||||
"trials": 24
|
||||
}
|
||||
@@ -0,0 +1,21 @@
|
||||
{
|
||||
"APL_target_PNs": 259,
|
||||
"all_PN_KC_contacts": 384555,
|
||||
"all_PN_KC_edges": 21882,
|
||||
"biophysical_coefficient_known": false,
|
||||
"calyx_affected_KCs": 3760,
|
||||
"calyx_blocked_contacts": 337099,
|
||||
"calyx_mask_edges": 20263,
|
||||
"calyx_other_contacts_retained_on_affected_edges": 28975,
|
||||
"edges": 25582938,
|
||||
"eligible_PNs": 229,
|
||||
"ineligible_PNs": 30,
|
||||
"mixed_CA_nonCA_edges": 3323,
|
||||
"neurons": 166700,
|
||||
"raw_contacts": 124177617,
|
||||
"same_bouton_confirmed": false,
|
||||
"unknown_ROI_contacts_in_original_PN_KC": 46159,
|
||||
"unknown_contacts_relabelled": 0,
|
||||
"whole_PN_contacts": 1268111,
|
||||
"whole_PN_edges": 116211
|
||||
}
|
||||
@@ -0,0 +1,25 @@
|
||||
trial,odor_index,odor_name,seed,condition,whole_spikes,KC_active,KC_active_fraction,KC_spikes,KC_late_spikes,KC82312_late_spikes,VA6_late_spikes,finite,wall_seconds,biological_ms
|
||||
0-131101-frozen_reference,0,ethyl (R)-(-)-3-hydroxybutanoate,131101,frozen_reference,1111590,160,0.03937007874015748,384,114,60,213,True,15.05500110599678,1000
|
||||
0-131101-calyx_PN_KC_contact_block,0,ethyl (R)-(-)-3-hydroxybutanoate,131101,calyx_PN_KC_contact_block,1108195,1,0.00024606299212598425,72,39,0,214,True,14.781203242993797,1000
|
||||
0-131101-all_PN_KC_block,0,ethyl (R)-(-)-3-hydroxybutanoate,131101,all_PN_KC_block,1108195,1,0.00024606299212598425,72,39,0,214,True,14.814815709993127,1000
|
||||
0-131101-whole_PN_output_block,0,ethyl (R)-(-)-3-hydroxybutanoate,131101,whole_PN_output_block,126,0,0.0,0,0,0,0,True,9.408489347988507,1000
|
||||
1-131101-frozen_reference,1,3-penten-2-one,131101,frozen_reference,1105228,172,0.04232283464566929,408,118,60,213,True,14.849270171995158,1000
|
||||
1-131101-calyx_PN_KC_contact_block,1,3-penten-2-one,131101,calyx_PN_KC_contact_block,1101977,2,0.0004921259842519685,73,39,0,213,True,14.829743235008209,1000
|
||||
1-131101-all_PN_KC_block,1,3-penten-2-one,131101,all_PN_KC_block,1105637,1,0.00024606299212598425,72,39,0,213,True,14.836084023001604,1000
|
||||
1-131101-whole_PN_output_block,1,3-penten-2-one,131101,whole_PN_output_block,161,0,0.0,0,0,0,0,True,9.406520318007097,1000
|
||||
2-131101-frozen_reference,2,(2R)-hexan-2-ol,131101,frozen_reference,1110776,144,0.03543307086614173,381,117,61,213,True,14.826602405999438,1000
|
||||
2-131101-calyx_PN_KC_contact_block,2,(2R)-hexan-2-ol,131101,calyx_PN_KC_contact_block,1108354,1,0.00024606299212598425,73,39,0,213,True,14.964074281990179,1000
|
||||
2-131101-all_PN_KC_block,2,(2R)-hexan-2-ol,131101,all_PN_KC_block,1108354,1,0.00024606299212598425,73,39,0,213,True,14.831739582994487,1000
|
||||
2-131101-whole_PN_output_block,2,(2R)-hexan-2-ol,131101,whole_PN_output_block,111,0,0.0,0,0,0,0,True,9.401394432992674,1000
|
||||
3-131101-frozen_reference,3,gamma-propyl-gamma-butyrolactone,131101,frozen_reference,1104953,151,0.037155511811023625,385,117,60,212,True,14.826186497011804,1000
|
||||
3-131101-calyx_PN_KC_contact_block,3,gamma-propyl-gamma-butyrolactone,131101,calyx_PN_KC_contact_block,1099001,2,0.0004921259842519685,73,39,0,212,True,14.787222463011858,1000
|
||||
3-131101-all_PN_KC_block,3,gamma-propyl-gamma-butyrolactone,131101,all_PN_KC_block,1104322,1,0.00024606299212598425,73,40,0,212,True,14.788134792994242,1000
|
||||
3-131101-whole_PN_output_block,3,gamma-propyl-gamma-butyrolactone,131101,whole_PN_output_block,91,0,0.0,0,0,0,0,True,9.370064136994188,1000
|
||||
4-131101-frozen_reference,4,2-methyl butyl acetate,131101,frozen_reference,1102887,139,0.03420275590551181,372,118,61,213,True,14.812315593997482,1000
|
||||
4-131101-calyx_PN_KC_contact_block,4,2-methyl butyl acetate,131101,calyx_PN_KC_contact_block,1096632,1,0.00024606299212598425,72,39,0,212,True,14.777685339009622,1000
|
||||
4-131101-all_PN_KC_block,4,2-methyl butyl acetate,131101,all_PN_KC_block,1096632,1,0.00024606299212598425,72,39,0,212,True,14.785283767996589,1000
|
||||
4-131101-whole_PN_output_block,4,2-methyl butyl acetate,131101,whole_PN_output_block,72,0,0.0,0,0,0,0,True,9.320402383003966,1000
|
||||
5-131101-frozen_reference,5,ethyl (S)-(+)-3-hydroxybutanoate,131101,frozen_reference,1113472,163,0.04010826771653543,395,119,61,214,True,14.947139675990911,1000
|
||||
5-131101-calyx_PN_KC_contact_block,5,ethyl (S)-(+)-3-hydroxybutanoate,131101,calyx_PN_KC_contact_block,1112931,1,0.00024606299212598425,72,39,0,214,True,14.830266532007954,1000
|
||||
5-131101-all_PN_KC_block,5,ethyl (S)-(+)-3-hydroxybutanoate,131101,all_PN_KC_block,1112931,1,0.00024606299212598425,72,39,0,214,True,14.83051910600625,1000
|
||||
5-131101-whole_PN_output_block,5,ethyl (S)-(+)-3-hydroxybutanoate,131101,whole_PN_output_block,188,0,0.0,0,0,0,0,True,9.454139529989334,1000
|
||||
|
@@ -0,0 +1,265 @@
|
||||
trial,neuron_idx,body_id,type,population,spikes,late_spikes,late_rate_hz
|
||||
0-131101-frozen_reference,30,10039,VL2a_adPN,ALPN,371,187,374.0
|
||||
0-131101-frozen_reference,179,10198,VA7l_adPN,ALPN,323,164,328.0
|
||||
0-131101-frozen_reference,484,10522,VL2p_adPN,ALPN,384,194,388.0
|
||||
0-131101-frozen_reference,1197,11289,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-frozen_reference,1381,11478,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-frozen_reference,1511,11620,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-frozen_reference,1644,11761,VP1d+VP4_l2PN1,ALPN,431,218,436.0
|
||||
0-131101-frozen_reference,6065,16610,VA7m_lPN,ALPN,324,164,328.0
|
||||
0-131101-frozen_reference,6842,17484,DC2_adPN,ALPN,340,171,342.0
|
||||
0-131101-frozen_reference,82312,109321,KC,KC,120,60,120.0
|
||||
0-131101-frozen_reference,133666,527577,VA6_adPN,ALPN,423,213,426.0
|
||||
0-131101-calyx_PN_KC_contact_block,30,10039,VL2a_adPN,ALPN,371,187,374.0
|
||||
0-131101-calyx_PN_KC_contact_block,179,10198,VA7l_adPN,ALPN,323,164,328.0
|
||||
0-131101-calyx_PN_KC_contact_block,484,10522,VL2p_adPN,ALPN,384,193,386.0
|
||||
0-131101-calyx_PN_KC_contact_block,1197,11289,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-calyx_PN_KC_contact_block,1381,11478,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-calyx_PN_KC_contact_block,1511,11620,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-calyx_PN_KC_contact_block,1644,11761,VP1d+VP4_l2PN1,ALPN,431,218,436.0
|
||||
0-131101-calyx_PN_KC_contact_block,6065,16610,VA7m_lPN,ALPN,324,164,328.0
|
||||
0-131101-calyx_PN_KC_contact_block,6842,17484,DC2_adPN,ALPN,339,171,342.0
|
||||
0-131101-calyx_PN_KC_contact_block,82312,109321,KC,KC,0,0,0.0
|
||||
0-131101-calyx_PN_KC_contact_block,133666,527577,VA6_adPN,ALPN,423,214,428.0
|
||||
0-131101-all_PN_KC_block,30,10039,VL2a_adPN,ALPN,371,187,374.0
|
||||
0-131101-all_PN_KC_block,179,10198,VA7l_adPN,ALPN,323,164,328.0
|
||||
0-131101-all_PN_KC_block,484,10522,VL2p_adPN,ALPN,384,193,386.0
|
||||
0-131101-all_PN_KC_block,1197,11289,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-all_PN_KC_block,1381,11478,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-all_PN_KC_block,1511,11620,lLN1_bc,ALLN,452,228,456.0
|
||||
0-131101-all_PN_KC_block,1644,11761,VP1d+VP4_l2PN1,ALPN,431,218,436.0
|
||||
0-131101-all_PN_KC_block,6065,16610,VA7m_lPN,ALPN,324,164,328.0
|
||||
0-131101-all_PN_KC_block,6842,17484,DC2_adPN,ALPN,339,171,342.0
|
||||
0-131101-all_PN_KC_block,82312,109321,KC,KC,0,0,0.0
|
||||
0-131101-all_PN_KC_block,133666,527577,VA6_adPN,ALPN,423,214,428.0
|
||||
0-131101-whole_PN_output_block,30,10039,VL2a_adPN,ALPN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,179,10198,VA7l_adPN,ALPN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,484,10522,VL2p_adPN,ALPN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,1197,11289,lLN1_bc,ALLN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,1381,11478,lLN1_bc,ALLN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,1511,11620,lLN1_bc,ALLN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,1644,11761,VP1d+VP4_l2PN1,ALPN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,6065,16610,VA7m_lPN,ALPN,0,0,0.0
|
||||
0-131101-whole_PN_output_block,6842,17484,DC2_adPN,ALPN,5,0,0.0
|
||||
0-131101-whole_PN_output_block,82312,109321,KC,KC,0,0,0.0
|
||||
0-131101-whole_PN_output_block,133666,527577,VA6_adPN,ALPN,0,0,0.0
|
||||
1-131101-frozen_reference,30,10039,VL2a_adPN,ALPN,369,187,374.0
|
||||
1-131101-frozen_reference,179,10198,VA7l_adPN,ALPN,321,163,326.0
|
||||
1-131101-frozen_reference,484,10522,VL2p_adPN,ALPN,383,195,390.0
|
||||
1-131101-frozen_reference,1197,11289,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-frozen_reference,1381,11478,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-frozen_reference,1511,11620,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-frozen_reference,1644,11761,VP1d+VP4_l2PN1,ALPN,430,218,436.0
|
||||
1-131101-frozen_reference,6065,16610,VA7m_lPN,ALPN,322,164,328.0
|
||||
1-131101-frozen_reference,6842,17484,DC2_adPN,ALPN,336,170,340.0
|
||||
1-131101-frozen_reference,82312,109321,KC,KC,119,60,120.0
|
||||
1-131101-frozen_reference,133666,527577,VA6_adPN,ALPN,420,213,426.0
|
||||
1-131101-calyx_PN_KC_contact_block,30,10039,VL2a_adPN,ALPN,369,187,374.0
|
||||
1-131101-calyx_PN_KC_contact_block,179,10198,VA7l_adPN,ALPN,321,163,326.0
|
||||
1-131101-calyx_PN_KC_contact_block,484,10522,VL2p_adPN,ALPN,382,194,388.0
|
||||
1-131101-calyx_PN_KC_contact_block,1197,11289,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-calyx_PN_KC_contact_block,1381,11478,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-calyx_PN_KC_contact_block,1511,11620,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-calyx_PN_KC_contact_block,1644,11761,VP1d+VP4_l2PN1,ALPN,430,218,436.0
|
||||
1-131101-calyx_PN_KC_contact_block,6065,16610,VA7m_lPN,ALPN,322,164,328.0
|
||||
1-131101-calyx_PN_KC_contact_block,6842,17484,DC2_adPN,ALPN,337,171,342.0
|
||||
1-131101-calyx_PN_KC_contact_block,82312,109321,KC,KC,0,0,0.0
|
||||
1-131101-calyx_PN_KC_contact_block,133666,527577,VA6_adPN,ALPN,420,213,426.0
|
||||
1-131101-all_PN_KC_block,30,10039,VL2a_adPN,ALPN,369,187,374.0
|
||||
1-131101-all_PN_KC_block,179,10198,VA7l_adPN,ALPN,321,163,326.0
|
||||
1-131101-all_PN_KC_block,484,10522,VL2p_adPN,ALPN,383,195,390.0
|
||||
1-131101-all_PN_KC_block,1197,11289,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-all_PN_KC_block,1381,11478,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-all_PN_KC_block,1511,11620,lLN1_bc,ALLN,450,228,456.0
|
||||
1-131101-all_PN_KC_block,1644,11761,VP1d+VP4_l2PN1,ALPN,430,218,436.0
|
||||
1-131101-all_PN_KC_block,6065,16610,VA7m_lPN,ALPN,322,164,328.0
|
||||
1-131101-all_PN_KC_block,6842,17484,DC2_adPN,ALPN,336,171,342.0
|
||||
1-131101-all_PN_KC_block,82312,109321,KC,KC,0,0,0.0
|
||||
1-131101-all_PN_KC_block,133666,527577,VA6_adPN,ALPN,420,213,426.0
|
||||
1-131101-whole_PN_output_block,30,10039,VL2a_adPN,ALPN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,179,10198,VA7l_adPN,ALPN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,484,10522,VL2p_adPN,ALPN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,1197,11289,lLN1_bc,ALLN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,1381,11478,lLN1_bc,ALLN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,1511,11620,lLN1_bc,ALLN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,1644,11761,VP1d+VP4_l2PN1,ALPN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,6065,16610,VA7m_lPN,ALPN,0,0,0.0
|
||||
1-131101-whole_PN_output_block,6842,17484,DC2_adPN,ALPN,5,0,0.0
|
||||
1-131101-whole_PN_output_block,82312,109321,KC,KC,0,0,0.0
|
||||
1-131101-whole_PN_output_block,133666,527577,VA6_adPN,ALPN,0,0,0.0
|
||||
2-131101-frozen_reference,30,10039,VL2a_adPN,ALPN,371,188,376.0
|
||||
2-131101-frozen_reference,179,10198,VA7l_adPN,ALPN,320,162,324.0
|
||||
2-131101-frozen_reference,484,10522,VL2p_adPN,ALPN,382,194,388.0
|
||||
2-131101-frozen_reference,1197,11289,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-frozen_reference,1381,11478,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-frozen_reference,1511,11620,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-frozen_reference,1644,11761,VP1d+VP4_l2PN1,ALPN,430,217,434.0
|
||||
2-131101-frozen_reference,6065,16610,VA7m_lPN,ALPN,322,164,328.0
|
||||
2-131101-frozen_reference,6842,17484,DC2_adPN,ALPN,336,171,342.0
|
||||
2-131101-frozen_reference,82312,109321,KC,KC,120,61,122.0
|
||||
2-131101-frozen_reference,133666,527577,VA6_adPN,ALPN,421,213,426.0
|
||||
2-131101-calyx_PN_KC_contact_block,30,10039,VL2a_adPN,ALPN,370,188,376.0
|
||||
2-131101-calyx_PN_KC_contact_block,179,10198,VA7l_adPN,ALPN,321,163,326.0
|
||||
2-131101-calyx_PN_KC_contact_block,484,10522,VL2p_adPN,ALPN,382,194,388.0
|
||||
2-131101-calyx_PN_KC_contact_block,1197,11289,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-calyx_PN_KC_contact_block,1381,11478,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-calyx_PN_KC_contact_block,1511,11620,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-calyx_PN_KC_contact_block,1644,11761,VP1d+VP4_l2PN1,ALPN,430,217,434.0
|
||||
2-131101-calyx_PN_KC_contact_block,6065,16610,VA7m_lPN,ALPN,323,164,328.0
|
||||
2-131101-calyx_PN_KC_contact_block,6842,17484,DC2_adPN,ALPN,336,171,342.0
|
||||
2-131101-calyx_PN_KC_contact_block,82312,109321,KC,KC,0,0,0.0
|
||||
2-131101-calyx_PN_KC_contact_block,133666,527577,VA6_adPN,ALPN,420,213,426.0
|
||||
2-131101-all_PN_KC_block,30,10039,VL2a_adPN,ALPN,370,188,376.0
|
||||
2-131101-all_PN_KC_block,179,10198,VA7l_adPN,ALPN,321,163,326.0
|
||||
2-131101-all_PN_KC_block,484,10522,VL2p_adPN,ALPN,382,194,388.0
|
||||
2-131101-all_PN_KC_block,1197,11289,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-all_PN_KC_block,1381,11478,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-all_PN_KC_block,1511,11620,lLN1_bc,ALLN,450,228,456.0
|
||||
2-131101-all_PN_KC_block,1644,11761,VP1d+VP4_l2PN1,ALPN,430,217,434.0
|
||||
2-131101-all_PN_KC_block,6065,16610,VA7m_lPN,ALPN,323,164,328.0
|
||||
2-131101-all_PN_KC_block,6842,17484,DC2_adPN,ALPN,336,171,342.0
|
||||
2-131101-all_PN_KC_block,82312,109321,KC,KC,0,0,0.0
|
||||
2-131101-all_PN_KC_block,133666,527577,VA6_adPN,ALPN,420,213,426.0
|
||||
2-131101-whole_PN_output_block,30,10039,VL2a_adPN,ALPN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,179,10198,VA7l_adPN,ALPN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,484,10522,VL2p_adPN,ALPN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,1197,11289,lLN1_bc,ALLN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,1381,11478,lLN1_bc,ALLN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,1511,11620,lLN1_bc,ALLN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,1644,11761,VP1d+VP4_l2PN1,ALPN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,6065,16610,VA7m_lPN,ALPN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,6842,17484,DC2_adPN,ALPN,0,0,0.0
|
||||
2-131101-whole_PN_output_block,82312,109321,KC,KC,0,0,0.0
|
||||
2-131101-whole_PN_output_block,133666,527577,VA6_adPN,ALPN,7,0,0.0
|
||||
3-131101-frozen_reference,30,10039,VL2a_adPN,ALPN,368,187,374.0
|
||||
3-131101-frozen_reference,179,10198,VA7l_adPN,ALPN,320,163,326.0
|
||||
3-131101-frozen_reference,484,10522,VL2p_adPN,ALPN,380,193,386.0
|
||||
3-131101-frozen_reference,1197,11289,lLN1_bc,ALLN,448,228,456.0
|
||||
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@@ -0,0 +1,199 @@
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||||
50d11647abe23cd7f259d6835e20fa46bfe0cdfe248d75ae69c6b21051b3680d INTERPRETATION.zh.md
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||||
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||||
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||||
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||||
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"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"trial": "olfactory-50hz",
|
||||
"wall_seconds": 5.067613077990245
|
||||
},
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"trial": "mechanosensory-50hz",
|
||||
"wall_seconds": 5.076028995012166
|
||||
},
|
||||
{
|
||||
"exact": {
|
||||
"counts": true,
|
||||
"g": true,
|
||||
"neuron_idx": true,
|
||||
"step": true,
|
||||
"v": true
|
||||
},
|
||||
"trial": "gustatory-50hz",
|
||||
"wall_seconds": 5.056191121999291
|
||||
}
|
||||
]
|
||||
}
|
||||
@@ -0,0 +1,4 @@
|
||||
{
|
||||
"baseline_exact_neurons": 11,
|
||||
"terminal_nonKC_arrivals_exact": true
|
||||
}
|
||||
@@ -0,0 +1,34 @@
|
||||
{
|
||||
"original": {
|
||||
"checked": 230239,
|
||||
"exclusions": [
|
||||
".cache",
|
||||
".git",
|
||||
".mypy_cache",
|
||||
".pytest_cache",
|
||||
".venv",
|
||||
"__pycache__",
|
||||
"node_modules",
|
||||
"venv"
|
||||
],
|
||||
"meaning": "All original listed bytes checked; only newly named stage outputs are additions.",
|
||||
"mismatches": [],
|
||||
"new_stage_additions_allowed": true,
|
||||
"pass": true,
|
||||
"reference_sha256": "6f186112e6102f2f7969de7442fa7ee4432200a3678586cfc4e10c490b31bca4"
|
||||
},
|
||||
"prior_experiment": {
|
||||
"checked": 68,
|
||||
"checksums_sha256": "a69b2511689207b0d9ddbe2fabce3be71908f457bb898e3b685a213a796a272a",
|
||||
"manifest_sha256": "6d75567af2a6c0993d4fc08e272814910c19fa9602811cfacd1ebc4ba76bc737",
|
||||
"mismatches": [],
|
||||
"pass": true
|
||||
},
|
||||
"prior_model": {
|
||||
"checked": 12,
|
||||
"checksums_sha256": "55dc418f2d62be04601af33cbd8789578447e6a2289d3a581dc713cbb7466a25",
|
||||
"manifest_sha256": "9120685eb02dc2bd3b38d42b2ade1f38f6bbc2a1ec269fd4d555cead2d628277",
|
||||
"mismatches": [],
|
||||
"pass": true
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,6 @@
|
||||
{
|
||||
"APL_matrices": true,
|
||||
"base": true,
|
||||
"frozen_effective_weights": true,
|
||||
"raw": true
|
||||
}
|
||||
@@ -0,0 +1,23 @@
|
||||
{
|
||||
"ComfyUI_queues": [
|
||||
{
|
||||
"pending": 0,
|
||||
"port": 8188,
|
||||
"running": 0
|
||||
},
|
||||
{
|
||||
"pending": 0,
|
||||
"port": 8189,
|
||||
"running": 0
|
||||
},
|
||||
{
|
||||
"pending": 0,
|
||||
"port": 8190,
|
||||
"running": 0
|
||||
}
|
||||
],
|
||||
"device": "NVIDIA GeForce RTX 4090",
|
||||
"free_VRAM": 12494438400,
|
||||
"timestamp_utc": "2026-09-29T16:16:57.370037+00:00",
|
||||
"total_VRAM": 50864390144
|
||||
}
|
||||
@@ -0,0 +1,12 @@
|
||||
{
|
||||
"finite": true,
|
||||
"fuzz_cases": 10000,
|
||||
"fuzz_seed": 41337,
|
||||
"input_nonmutation": true,
|
||||
"never_sign_flip_or_amplify": true,
|
||||
"pass": true,
|
||||
"source_sha256": "971136a667367a84cfc50ebc3fa73a749eddb8b8e1ca6931708ba67bfc12f0c1",
|
||||
"unit_tests": 6,
|
||||
"unittest_log": "test_duplicates_rejected (test_scope.ScopeTests) ... ok\ntest_existing_edge_only (test_scope.ScopeTests) ... ok\ntest_invalid_partition_rejected (test_scope.ScopeTests) ... ok\ntest_partial_and_full (test_scope.ScopeTests) ... ok\ntest_roi_and_side_not_guessed (test_scope.ScopeTests) ... ok\ntest_zero_identity_and_nonmutation (test_scope.ScopeTests) ... ok\n\n----------------------------------------------------------------------\nRan 6 tests in 0.017s\n\nOK\n",
|
||||
"zero_identity_bitwise": true
|
||||
}
|
||||
@@ -0,0 +1,45 @@
|
||||
condition,neuron_idx,arrival_unchanged,arrival_L1_difference,conditional_late_spikes,all_other_recorded_events_and_APL_fixed,whole_brain_causality_claim
|
||||
frozen_reference,30,True,0.0,187,True,False
|
||||
calyx_PN_KC_contact_block,30,True,0.0,187,True,False
|
||||
all_PN_KC_block,30,True,0.0,187,True,False
|
||||
whole_PN_output_block,30,False,2603.4250798225403,186,True,False
|
||||
frozen_reference,179,True,0.0,164,True,False
|
||||
calyx_PN_KC_contact_block,179,True,0.0,164,True,False
|
||||
all_PN_KC_block,179,True,0.0,164,True,False
|
||||
whole_PN_output_block,179,False,2433.4745279848576,159,True,False
|
||||
frozen_reference,484,True,0.0,194,True,False
|
||||
calyx_PN_KC_contact_block,484,True,0.0,194,True,False
|
||||
all_PN_KC_block,484,True,0.0,194,True,False
|
||||
whole_PN_output_block,484,False,2778.325125724077,193,True,False
|
||||
frozen_reference,1197,True,0.0,228,True,False
|
||||
calyx_PN_KC_contact_block,1197,True,0.0,228,True,False
|
||||
all_PN_KC_block,1197,True,0.0,228,True,False
|
||||
whole_PN_output_block,1197,False,233827.83066305518,227,True,False
|
||||
frozen_reference,1381,True,0.0,228,True,False
|
||||
calyx_PN_KC_contact_block,1381,True,0.0,228,True,False
|
||||
all_PN_KC_block,1381,True,0.0,228,True,False
|
||||
whole_PN_output_block,1381,False,263067.20497968793,227,True,False
|
||||
frozen_reference,1511,True,0.0,228,True,False
|
||||
calyx_PN_KC_contact_block,1511,True,0.0,228,True,False
|
||||
all_PN_KC_block,1511,True,0.0,228,True,False
|
||||
whole_PN_output_block,1511,False,247104.5574080348,227,True,False
|
||||
frozen_reference,1644,True,0.0,218,True,False
|
||||
calyx_PN_KC_contact_block,1644,True,0.0,218,True,False
|
||||
all_PN_KC_block,1644,True,0.0,218,True,False
|
||||
whole_PN_output_block,1644,False,27596.52651181817,216,True,False
|
||||
frozen_reference,6065,True,0.0,164,True,False
|
||||
calyx_PN_KC_contact_block,6065,True,0.0,164,True,False
|
||||
all_PN_KC_block,6065,True,0.0,164,True,False
|
||||
whole_PN_output_block,6065,False,6536.750062584877,152,True,False
|
||||
frozen_reference,6842,True,0.0,171,True,False
|
||||
calyx_PN_KC_contact_block,6842,True,0.0,171,True,False
|
||||
all_PN_KC_block,6842,True,0.0,171,True,False
|
||||
whole_PN_output_block,6842,False,5408.699882417917,162,True,False
|
||||
frozen_reference,82312,True,0.0,60,True,False
|
||||
calyx_PN_KC_contact_block,82312,False,13211.275120049715,0,True,False
|
||||
all_PN_KC_block,82312,False,13676.575129687786,0,True,False
|
||||
whole_PN_output_block,82312,False,13676.575129687786,0,True,False
|
||||
frozen_reference,133666,True,0.0,213,True,False
|
||||
calyx_PN_KC_contact_block,133666,True,0.0,213,True,False
|
||||
all_PN_KC_block,133666,True,0.0,213,True,False
|
||||
whole_PN_output_block,133666,False,14746.32684147358,210,True,False
|
||||
|
@@ -0,0 +1,16 @@
|
||||
{
|
||||
"experiments/phase4ab-terminal-scope": {
|
||||
"checked": 199,
|
||||
"checksums_sha256": "d83926a3055d9f9ca471ceba328076d7ceba883f267468750914080733e95e31",
|
||||
"manifest_sha256": "cb3723f9dae29d4889489ae39f40293c927f4f9e532551e2c4d5214bf0a70140",
|
||||
"mismatches": [],
|
||||
"pass": true
|
||||
},
|
||||
"models/male-cns-lif/terminal-scope-diagnostic-v1": {
|
||||
"checked": 11,
|
||||
"checksums_sha256": "92a03195cb41863027fd0397ad3811248354a5d3f2e91ffa2c297eba62dc2821",
|
||||
"manifest_sha256": "5cea0035a95345825b73385c6e3056244c2a614d10a6fa6742487a331d8f0f3e",
|
||||
"mismatches": [],
|
||||
"pass": true
|
||||
}
|
||||
}
|
||||
Reference in New Issue
Block a user