{ "strata": { "all": { "neurons": 20, "source_groups": { "KC": { "due_edges": 9, "accepted_edges": 9, "rejected_edges": 0, "due_contacts": 114, "accepted_contacts": 114, "rejected_contacts": 0, "accepted_exc_SI": 0.03135, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "APL": { "due_edges": 14, "accepted_edges": 13, "rejected_edges": 1, "due_contacts": 643, "accepted_contacts": 437, "rejected_contacts": 206, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "ALPN": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "MBON": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "anatomical_DAN": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "dopamine_annotation_only": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "other": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "unclassified": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 } }, "no_accepted_exc_neurons": 17, "no_accepted_ALPN_exc_neurons": 20, "has_exc_but_never_active": 3, "metrics_sum": { "APL_write_SI": 0.12838200060278177, "APL_write_ref_SI": 0.02494981119036675, "APL_write_available_SI": 0.10343218941241503, "APL_pre_first_spike_SI": 0.08725184304267168, "APL_same_tick_first_spike_SI": 0.00021354518830776214, "negative_g_ticks": 1319.0, "refractory_ticks": 66.0, "g_end_time_integral_V_ms": -0.2082639611724107, "V_end_time_integral_V_ms": -10.419796073068802, "accepted_exc_before_first_SI": 0.03135, "accepted_inh_before_first_abs_SI": 0.0, "APL_zeroed_due_edges": 14.0, "APL_zeroed_due_contacts": 643.0 }, "source_g_area_V_ms": { "KC_exc": 0.10750953817951345, "KC_inh": 0.0, "APL_exc": 0.0, "APL_inh": 0.0, "ALPN_exc": 0.0, "ALPN_inh": 0.0, "MBON_exc": 0.0, "MBON_inh": 0.0, "anatomical_DAN_exc": 0.0, "anatomical_DAN_inh": 0.0, "dopamine_annotation_only_exc": 0.0, "dopamine_annotation_only_inh": 0.0, "other_exc": 0.0, "other_inh": 0.0, "unclassified_exc": 0.0, "unclassified_inh": 0.0, "graded_APL": -0.31577349935192406 }, "initial_g_state_area_V_ms": 0.0, "source_g_area_residual_V_ms": 7.979727989493313e-17, "maximum_prethreshold_V": -0.044, "minimum_end_g_V": -0.01784156152581062 }, "ever_active": { "neurons": 1, "source_groups": { "KC": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "APL": { "due_edges": 1, "accepted_edges": 0, "rejected_edges": 1, "due_contacts": 206, "accepted_contacts": 0, "rejected_contacts": 206, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "ALPN": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "MBON": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "anatomical_DAN": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "dopamine_annotation_only": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "other": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "unclassified": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 } }, "no_accepted_exc_neurons": 1, "no_accepted_ALPN_exc_neurons": 1, "has_exc_but_never_active": 0, "metrics_sum": { "APL_write_SI": 0.041130157560110105, "APL_write_ref_SI": 0.02494981119036675, "APL_write_available_SI": 0.01618034636974335, "APL_pre_first_spike_SI": 0.0, "APL_same_tick_first_spike_SI": 0.00021354518830776214, "negative_g_ticks": 100.0, "refractory_ticks": 66.0, "g_end_time_integral_V_ms": -0.08216195081067657, "V_end_time_integral_V_ms": -0.524034685199687, "accepted_exc_before_first_SI": 0.0, "accepted_inh_before_first_abs_SI": 0.0, "APL_zeroed_due_edges": 1.0, "APL_zeroed_due_contacts": 206.0 }, "source_g_area_V_ms": { "KC_exc": 0.0, "KC_inh": 0.0, "APL_exc": 0.0, "APL_inh": 0.0, "ALPN_exc": 0.0, "ALPN_inh": 0.0, "MBON_exc": 0.0, "MBON_inh": 0.0, "anatomical_DAN_exc": 0.0, "anatomical_DAN_inh": 0.0, "dopamine_annotation_only_exc": 0.0, "dopamine_annotation_only_inh": 0.0, "other_exc": 0.0, "other_inh": 0.0, "unclassified_exc": 0.0, "unclassified_inh": 0.0, "graded_APL": -0.08216195081067657 }, "initial_g_state_area_V_ms": 0.0, "source_g_area_residual_V_ms": 0.0, "maximum_prethreshold_V": -0.044, "minimum_end_g_V": -0.01784156152581062 }, "never_active": { "neurons": 19, "source_groups": { "KC": { "due_edges": 9, "accepted_edges": 9, "rejected_edges": 0, "due_contacts": 114, "accepted_contacts": 114, "rejected_contacts": 0, "accepted_exc_SI": 0.03135, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "APL": { "due_edges": 13, "accepted_edges": 13, "rejected_edges": 0, "due_contacts": 437, "accepted_contacts": 437, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "ALPN": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "MBON": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "anatomical_DAN": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "dopamine_annotation_only": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "other": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 }, "unclassified": { "due_edges": 0, "accepted_edges": 0, "rejected_edges": 0, "due_contacts": 0, "accepted_contacts": 0, "rejected_contacts": 0, "accepted_exc_SI": 0.0, "accepted_inh_abs_SI": 0.0, "rejected_exc_SI": 0.0, "rejected_inh_abs_SI": 0.0 } }, "no_accepted_exc_neurons": 16, "no_accepted_ALPN_exc_neurons": 19, "has_exc_but_never_active": 3, "metrics_sum": { "APL_write_SI": 0.08725184304267168, "APL_write_ref_SI": 0.0, "APL_write_available_SI": 0.08725184304267168, "APL_pre_first_spike_SI": 0.08725184304267168, "APL_same_tick_first_spike_SI": 0.0, "negative_g_ticks": 1219.0, "refractory_ticks": 0.0, "g_end_time_integral_V_ms": -0.12610201036173413, "V_end_time_integral_V_ms": -9.895761387869115, "accepted_exc_before_first_SI": 0.03135, "accepted_inh_before_first_abs_SI": 0.0, "APL_zeroed_due_edges": 13.0, "APL_zeroed_due_contacts": 437.0 }, "source_g_area_V_ms": { "KC_exc": 0.10750953817951345, "KC_inh": 0.0, "APL_exc": 0.0, "APL_inh": 0.0, "ALPN_exc": 0.0, "ALPN_inh": 0.0, "MBON_exc": 0.0, "MBON_inh": 0.0, "anatomical_DAN_exc": 0.0, "anatomical_DAN_inh": 0.0, "dopamine_annotation_only_exc": 0.0, "dopamine_annotation_only_inh": 0.0, "other_exc": 0.0, "other_inh": 0.0, "unclassified_exc": 0.0, "unclassified_inh": 0.0, "graded_APL": -0.23361154854124752 }, "initial_g_state_area_V_ms": 0.0, "source_g_area_residual_V_ms": 7.979727989493313e-17, "maximum_prethreshold_V": -0.05080399585029547, "minimum_end_g_V": -0.007960243986639626 } }, "ledger_max_abs_error_V": 0.0, "ledger_max_bound_V": 5.765035551123952e-17, "ledger_roundoff_bound_pass": true, "ledger_accumulator_mantissa_bits": 63, "ledger_bound_formula": "64 * eps(longdouble) * (ticks+1) * (sum_abs_actual_stage_deltas + abs(initial_g) + abs(final_g)) per KC", "source_shadow_max_residual_V": 8.673617379884035e-18, "source_area_max_residual_V_ms": 2.7755575615628914e-17, "source_shadow_meaning": "Signed source/sign g bookkeeping under observed availability/reset only; non-feedback, not counterfactual", "cumulative_increment_units": "SI volts; sums of individual increments, not instantaneous conductance", "source_state_area_units": "V*ms; post-APL source-state left samples times dt .1ms", "activity_strata_outcome_defined": true, "APL_cause_of_CAL_failure_proven": false, "full_CAL_all_tick_subset_state_independently_verified": false, "case": "kc_ref_boundary", "repeat": 0, "kind": "fixture", "pass_all": true, "exact": { "v": true, "g": true, "ref": true, "counts": true, "step": true, "neuron_idx": true }, "full_KC_sparse_events_and_final_state_exact": true, "every_tick_fixture_pre_post_state_exact": true, "graph": { "graph_name": "fixtures", "graph_nodes": 44, "graph_edges": 287, "KC_targets": 20, "incoming_edges": 111, "incoming_contacts": 2882, "zeroed_APL_incoming_edges": 27, "groups": { "KC": { "edges": 49, "contacts": 210 }, "APL": { "edges": 27, "contacts": 1794 }, "ALPN": { "edges": 22, "contacts": 622 }, "MBON": { "edges": 0, "contacts": 0 }, "anatomical_DAN": { "edges": 0, "contacts": 0 }, "dopamine_annotation_only": { "edges": 0, "contacts": 0 }, "other": { "edges": 13, "contacts": 256 }, "unclassified": { "edges": 0, "contacts": 0 } }, "source_graph": "/data/digital-drosophila/experiments/phase4ag-author-apl-r2/graphs/fixtures", "conditional_target_filter_only": true, "source_graph_modified": false }, "input": { "requests": 6, "accepted": 3, "rejected": 3, "actual_spikes_by_source_group": { "KC": 3, "APL": 1, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 0, "other": 0, "unclassified": 0 }, "all_ALPN": 686, "odor_design_target_count": 0, "PN_ever_requested": 0, "PN_ever_accepted_request": 0, "PN_actual_active": 0, "design_target_PN_spikes": 0, "non_design_ALPN_spikes": 0, "accepted_request_is_not_proof_spike_was_caused_exclusively_by_request": true, "actual_requested_events_not_forced_to_equal_across_odors": true }, "steps": 100, "duration_ms": 10.0, "KC_active": 1, "KC_spikes": 3, "pending_after_record_window": { "edge_events": 0, "contacts": 0, "nominal_abs_SI": 0.0 }, "mode": null, "odor_id": null, "seed": null, "CPU_audit_wall_seconds": 0.12063973299882491, "original_brain_time_and_wall_not_rebenchmarked": true, "training": false, "new_brain_simulation": false, "candidate_generated": false, "input_sha256": { "state.npz": "cfabddcd199a03da9acb981c3791031d8d5926f244e3d3b5d9556133e4b23868", "apl-inhibition.float32.npy": "f915b04b78d1660e20f0f97874564454c97dc306a84ae0383cdb09b0ae5bf67f", "requests.csv": "92179fda232356e4cad1f94a05e0cf1c9da13299cc5e6ab5c0a0d64e77d90fc0", "summary.json": "c9a200cdabe861ba45985d027b7766e5ef5e7f30878080ab9dd1fdc4d67ce2f3" } }