{ "neurons": 166700, "groups": { "KC": 4064, "APL": 2, "ALPN": 686, "MBON": 97, "anatomical_DAN": 340, "dopamine_annotation_only": 52, "other": 160143, "unclassified": 1316 }, "group_order": [ "KC", "APL", "ALPN", "MBON", "anatomical_DAN", "dopamine_annotation_only", "other", "unclassified" ], "all_neurons_assigned_once": true, "labels_index": "global neuron_idx, identical to canonical row index", "identity_conflicts_present": false, "pass_all": true, "pass_all_scope": "schema, complete disjoint accounting and no conflicting exact identities; not biological validation", "flags": { "annotation_DPM": 2, "metadata_dopamine": 392, "annotation_DAN": 340, "identity_conflict": 0, "multiple_exact_group_hits": 0, "no_anatomical_annotation": 1316, "DAN_name_prefix_without_DAN_class": 0, "metadata_dopamine_not_annotation_DAN": 54, "annotation_DAN_not_metadata_dopamine": 2, "has_raw_ground_truth": 85484 }, "flag_counts_by_group": { "annotation_DPM": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 0, "other": 2, "unclassified": 0 }, "metadata_dopamine": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 338, "dopamine_annotation_only": 52, "other": 2, "unclassified": 0 }, "annotation_DAN": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 340, "dopamine_annotation_only": 0, "other": 0, "unclassified": 0 }, "identity_conflict": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 0, "other": 0, "unclassified": 0 }, "multiple_exact_group_hits": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 0, "other": 0, "unclassified": 0 }, "no_anatomical_annotation": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 0, "other": 0, "unclassified": 1316 }, "DAN_name_prefix_without_DAN_class": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 0, "other": 0, "unclassified": 0 }, "metadata_dopamine_not_annotation_DAN": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 0, "dopamine_annotation_only": 52, "other": 2, "unclassified": 0 }, "annotation_DAN_not_metadata_dopamine": { "KC": 0, "APL": 0, "ALPN": 0, "MBON": 0, "anatomical_DAN": 2, "dopamine_annotation_only": 0, "other": 0, "unclassified": 0 }, "has_raw_ground_truth": { "KC": 0, "APL": 2, "ALPN": 573, "MBON": 65, "anatomical_DAN": 338, "dopamine_annotation_only": 42, "other": 84464, "unclassified": 0 } }, "DPM_neuron_idx": [ 1618, 2403 ], "identity_conflict_neuron_idx": [], "uncertain_DAN_prefix_neuron_idx": [], "definitions": { "KC": "annotation_class exactly Kenyon_Cell", "APL": "annotation_type exactly APL", "ALPN": "annotation_class exactly ALPN; annotation_class olfactory is NOT included", "MBON": "annotation_class exactly MBON", "anatomical_DAN": "annotation_class exactly DAN, no exact identity conflict; not inferred from NT or PAM/PPL1 prefix", "dopamine_annotation_only": "normalized neurotransmitter=dopamine, no named exact group, no DPM; transmitter-evidence diagnostic, NOT DAN", "other": "remaining annotated neurons, explicitly including non-conflicting annotation_type DPM", "unclassified": "conflicting exact identity, no anatomical class/type evidence, or only uncertain DAN-name hint without class/NT evidence" }, "uncertainty_policy": { "explicit_unknown_tokens_casefolded": [ "", "unknown", "unclear", "unclassified" ], "PAM_PPL1_DAN_prefix_never_assigns_identity": true, "transmitter_role_and_anatomical_identity_are_separate": true, "DPM_retained_as_other_with_explicit_flag": true, "missing_ground_truth_is_not_filled_or_guessed": true, "other_does_not_mean_known_function": true }, "provenance": { "metadata_path_contract": "context.META; caller must verify its preregistered SHA-256 before loading", "metadata_expected_sha256_from_AG_r2": "922af16846a065c3dbfca7c11146b83ca217fcbd7392edc745f444a04eae8c63", "frozen_rules_path": "/data/digital-drosophila/models/male-cns-lif/transmitter-audit-v1/transmitter_roles_v1.py", "frozen_rules_sha256": "76ba0cae6c5db417ec030456797f7935216c6877bd339d5e435133a0061e3930", "frozen_sidecar_path": "/data/digital-drosophila/experiments/phase4x-transmitter-provenance/roles/neuron-evidence-axes.parquet", "frozen_sidecar_sha256": "8b51d12d84d66cdca66aeb7d052a24e520b9c28f462bd6bf87f37dda85c33284", "frozen_MB_DAN_mapping_path": "/data/digital-drosophila/experiments/phase4h-dopamine-plasticity/mappings/dan-to-mbon-confirmed.parquet", "frozen_MB_DAN_mapping_used_to_assign_identity": false, "file_hash_verified_by_this_pure_function": false, "differences_from_4X_reporting": "ALPN separated from broader olfactory class; DPM grouped other with flag; absent/conflicting identity explicitly unclassified" }, "source_graph_changed": false, "simulation_executed": false, "heldout_dynamic_access": false, "reward_or_valence_inferred": false }